Thiomicrorhabdus immobilis: THMIRHAM_04260
Help
Entry
THMIRHAM_04260 CDS
T08420
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THMIRHAM_04260 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tib03400
]
THMIRHAM_04260 (ung)
Enzymes [BR:
tib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THMIRHAM_04260 (ung)
DNA repair and recombination proteins [BR:
tib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THMIRHAM_04260 (ung)
Prokaryotic type
THMIRHAM_04260 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
BCN92641
UniProt:
A0ABM7MBB2
LinkDB
All DBs
Position
complement(499150..499839)
Genome browser
AA seq
229 aa
AA seq
DB search
MIQDNSQIKLDSSWLPYLEAEFSKPYMQQLKAFLLAEKQQGKQILPKGNEWFNALNSTPL
DQVKVVILGQDPYPTPGHAHGLCFSVQKHVKPLPKSLLNINKELQDDLGINNDHTGYLQP
WAEQGVLLLNAVLTVEAGKANAHQNKGWEQFTDAIIATVNQKTEHTVFILWGAYAQKKGK
MIDRQKHLVIESPHPSPLSAYRGFFGSKPFSKVNHYLKQHQKQGIDWQL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagataattcacagataaaactggacagtagctggctaccttatctagaggcc
gagttttccaaaccctatatgcaacagctaaaggcttttttacttgctgaaaaacaacag
ggaaaacagattttacctaaaggcaatgaatggtttaacgccctcaatagcacgccgctt
gatcaagttaaggtggttattttgggacaagacccctatccaacacctgggcatgcccat
ggattgtgtttttctgtgcaaaaacacgttaagccgttacctaaatcattgctgaatatc
aataaagaactacaagatgacttaggcattaataatgaccatacgggttatttgcagccc
tgggcagaacaaggtgttttgttactcaacgcggtattaacggtcgaagcaggcaaggcc
aacgcccatcaaaacaaaggatgggagcaattcaccgatgccattatcgccacagtcaat
caaaagaccgaacatacggtatttattttgtggggagcctatgctcagaaaaaaggcaag
atgattgatcgacaaaaacacttggtgattgaaagcccgcacccttctccgctgtcagcc
tatcgtggtttttttggcagcaaacccttttctaaggtgaaccactatctaaaacagcat
caaaaacaaggtatcgactggcaactgtag
DBGET
integrated database retrieval system
