Thermococcus indicus: FH039_05780
Help
Entry
FH039_05780 CDS
T07099
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
tic
Thermococcus indicus
Pathway
tic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FH039_05780 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tic03019
]
FH039_05780 (prf1)
03012 Translation factors [BR:
tic03012
]
FH039_05780 (prf1)
Messenger RNA biogenesis [BR:
tic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
FH039_05780 (prf1)
Translation factors [BR:
tic03012
]
Eukaryotic type
Release factors
FH039_05780 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
zf-RRPl_C4
Zn_ribbon_8
TssR_VWA
PhosphMutase
zf-ChsH2
Motif
Other DBs
NCBI-ProteinID:
QDA31206
UniProt:
A0A4Y5SK42
LinkDB
All DBs
Position
complement(1055268..1056515)
Genome browser
AA seq
415 aa
AA seq
DB search
MSHKSAEMYELKKKVEELKGYRGRATELVTLYVPAGYDLNKVMQQLREEYGTAQNIKSKS
TRKNVLGALERAMQHLKLYRKTPETGLALFVGNVSEQEGVSDIKLWAIIPPEPLKVRLYR
CDQTFITEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIDVIDELTSNVPGKTRAGGQS
ARRYERIREQETHEFMKRIAEHANKAFLPLLEKGELRGIIIGGPGPTKEDFIDGEYLHHE
LRKKIIGVVDISYSGAYGLKELVEKASDILKDHEAIKERHLIQNFFRHLVKDTGMITYGE
NEVRKALELGAVDTLLISEGYDRVRVRAKCNSCGWSEEKTMSEQEFHVYRKKLTHCPKCG
SQNLDFEKWDVAEELIKMAEEAGSEVEVISLDTEEGQQFYKAFGGIAAFLRYKIQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaagtcagccgagatgtatgaactcaagaagaaggtcgaggagctgaagggt
tatcgaggtcgagccaccgaactggtgaccctctacgttccggccggatacgatctgaac
aaggtcatgcagcagctgagggaggagtacgggacggcccagaacatcaagagcaagtca
acccgaaagaacgtcctcggtgcccttgagagggcgatgcagcacctcaagctctaccgc
aagacccccgagaccggtctggccctcttcgtcggaaacgtcagcgagcaggagggcgtc
agcgacataaagctctgggcgataatccctccagaacccctcaaggtcaggctctaccgg
tgcgaccagaccttcatcaccgagccgctggaggagatgctccgcgtcaaggacgcctac
ggcctcataaccgttgagaagaacgaagccaccataggtctcctgcgcgggaagaggata
gacgtcatcgacgagctgacctccaacgtgcccggtaagaccagggcaggtggtcagtcg
gccaggcgttacgagcgcatccgtgagcaggagacccacgagttcatgaagcgcatcgcc
gagcacgccaacaaggcattcctccccctcctggagaagggcgagctgaggggcatcatc
ataggcggcccgggaccgaccaaggaggacttcatagacggcgagtacctccaccacgag
ctaaggaagaagataatcggcgtcgttgacatcagctacagcggggcctacggcctcaag
gagctcgtcgagaaggccagcgacatcctcaaagaccacgaggccataaaggagcgccac
ctcatacagaacttcttcaggcacctcgtcaaggacacagggatgataacgtacggtgag
aacgaagtcaggaaggccctggagctcggcgccgtcgatacgctcctcatcagcgagggc
tatgacagggtcagggtcagggccaagtgcaacagctgcggctggagcgaagaaaaaact
atgagcgagcaggagttccatgtttacaggaaaaaactcactcactgccccaagtgcggc
agtcagaacctggacttcgagaagtgggacgtcgcggaggagctaataaagatggcggag
gaggccggctccgaggtggaggtcatctccctcgacaccgaggagggccagcagttctac
aaggccttcggcggaatagcggcgttcctgaggtacaagattcagtga
DBGET
integrated database retrieval system
