Thiomicrolovo immobilis: WCX72_02230
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Entry
WCX72_02230 CDS
T11235
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00190
Oxidative phosphorylation
timm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
WCX72_02230
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCX72_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
timm03019
]
WCX72_02230
Enzymes [BR:
timm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
WCX72_02230
Messenger RNA biogenesis [BR:
timm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
WCX72_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
XAU05816
LinkDB
All DBs
Position
complement(429844..431937)
Genome browser
AA seq
697 aa
AA seq
DB search
MTNLKDPKFYFNRELSWLQFNTRVLQQAQDKKQPLLERLKFLAIYGTNLDEFYMIRVAGL
KKLFTSGIILSGPDRLTPLQQLREIRKYLHQELQVVEHTFIEIMAGLKDEGIFLKRYQEL
TNQEKGEVNRYFHEHIYPVIVPIAVDGTHPFPHLNNLSFGLIVKLQDNDDPSVQRYGLVR
IPRVLPRFVQIGTGIYVPIGSIVAQHIDELFPGYTLLQYTPFRVTRNADITIEEEEADDF
MEMLEEGLKLRKKGELVRLEIGIDADDELIDFFNRHTNVYKDDLYRFKIVLNLASLWQIV
GNKDFAHLVAAPYKPRNLPPLDSEDSIYSVLDKQDILLYHPYESFEPIVKFIQAAAKDPD
VVSIRMTLYRSGTNSPIVNALMQAAESGKQVTTMVELKARFDEENNLIWAKALESAGAHV
IYGIPGFKVHAKAALVTRKVGDKLKQYAHLGTGNYNPSTAKIYTDVSYMTSNEAITNDMT
RFFHFLTGFSKKGKLNKLYMSPTQTKPKVLSLIQNETRMGTVGRIIVKVNSLVDEDVIRA
LYKASQAGVKVDLIVRGICCLVPGIEGVSENIRVTSLIGKYLEHARVFYFKHGHPQMYIS
SADWMPRNLVRRIELMTGIEDEESKEKLLQLLTLQLTDNVLAHELQSDGSYHRVETGETA
VNSQLLLEQHTTKLYKSSKKRDTTYINKLASRLFKES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctcaaagacccaaaattctatttcaaccgtgaactctcctggctgcagttc
aatacgcgcgtgctgcagcaggcgcaggacaagaagcagccgctgcttgaacgcctgaag
ttccttgccatctatggcaccaacctcgatgaattctatatgatccgtgtcgcgggtctc
aagaaactctttacttccgggatcatcctctccggccccgaccgcctcaccccgctgcag
cagctgcgcgagatccgcaagtacctccaccaggagctgcaggtcgtcgagcacaccttc
atcgagatcatggccggtcttaaagacgaggggatctttctcaaacgctaccaggagctg
accaaccaggagaagggggaggtcaaccgctacttccacgaacacatctacccggtcatc
gtcccgatcgccgtcgacggaacccaccccttcccgcacctgaacaacctcagtttcggc
ctgatcgtcaagctccaggacaatgacgatcccagcgtccagcgctacggcctcgtgcgc
atcccccgggtcctcccccgtttcgtgcagatcggcaccgggatctacgtccccatcggc
agcatcgtcgcccagcacatcgacgagcttttcccgggctacaccctgctgcagtacacc
cccttccgcgtcacgcgcaacgccgacatcaccatcgaggaggaggaagcggacgacttc
atggagatgctcgaagaggggctgaaactccgcaaaaaaggggagctggtccgtctcgag
atcgggatcgacgccgacgacgaactgatcgactttttcaaccgccataccaacgtctac
aaagacgacctctaccgcttcaagatcgtgctcaacctcgccagcctctggcagatcgtc
ggcaacaaggattttgcgcacctcgtcgcggcgccgtacaaaccgcgcaacctgccgccg
ctggattccgaggacagcatctactccgtcctcgacaaacaggatatcctgctctaccac
ccctacgagagtttcgagcccatcgtcaagttcatccaggcagcggccaaggaccccgat
gtcgtctccatccggatgacgctctaccgcagcgggacgaactcccccatcgtcaacgcc
ctgatgcaggcggccgaatcgggcaagcaggtcacgaccatggtcgaactcaaagcgcgt
ttcgacgaagagaacaaccttatctgggccaaagcgctggagagcgcgggggcgcacgtt
atctacggcatccccggcttcaaagtccacgccaaggccgccctcgtcacccgtaaggtc
ggcgacaagctcaaacagtacgcccacctcggcacggggaactacaaccccagtacggcg
aagatctataccgatgtcagctacatgacctccaacgaggcaatcaccaacgacatgacc
cgcttcttccactttttgacgggcttcagcaaaaaagggaaactcaacaagctttacatg
tcgccgacccagaccaagccgaaggtcctctccctgatccagaacgaaacccgtatgggg
acggtggggcgcattatcgtcaaggtcaactccctcgtcgacgaggatgtcattcgcgcg
ctctataaagcgtcgcaggccggggtcaaagtcgacctgatcgtccgcgggatctgctgc
ctcgtcccgggcattgaaggggtgagcgaaaacatccgggtcacctcgctgatcggaaaa
tatctcgaacacgcccgtgtcttctacttcaaacacggccatccgcagatgtacatctcc
agcgccgactggatgccgcgcaacctcgtgcgccgaatcgagctgatgacgggcattgag
gatgaagagtccaaagagaagctcctgcagctgcttaccctccagctcacggacaacgtc
cttgcccatgaactacagagcgatggcagctaccaccgggtcgagaccggcgagacagcg
gtcaactcccagctcctgctcgagcagcatacgaccaagctctacaaatcatccaaaaaa
cgcgatacgacctatatcaacaagctggcctcccgtctcttcaaagagagctga
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