Thiomicrolovo immobilis: WCX72_09440
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Entry
WCX72_09440 CDS
T11235
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WCX72_09440 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
timm03400
]
WCX72_09440 (ung)
Enzymes [BR:
timm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
WCX72_09440 (ung)
DNA repair and recombination proteins [BR:
timm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WCX72_09440 (ung)
Prokaryotic type
WCX72_09440 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XAU04719
LinkDB
All DBs
Position
complement(1826301..1826984)
Genome browser
AA seq
227 aa
AA seq
DB search
MQIDPKIDPSWKRVLSSEFEQPYFQELKRFLLGEKAAFIIYPKGADIFAAYNLTPYEKVK
VVILGQDPYHGPNQAHGLAFSVQRGIAHPPSLQNIFKELREDIGCAVPQHGTLEAWAQQG
VFLLNTVLTVREGQAHSHKEQGWERFTDATIKALSDGREKLVFILWGRPAQMKASLIDAS
RHHIITSPHPSPLSAYRGFFGSKPFSRTNSYLQSAGIAPIDWCLNDV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaccccaagatcgacccctcgtggaagcgtgtgctttcctcggaattcgag
cagccctattttcaggagttgaagcgatttcttctcggtgaaaaagctgcttttatcatc
tatcccaaaggtgccgacattttcgctgcatacaatctgacaccctatgagaaggtcaaa
gtcgtgatactcggtcaggacccctaccatggcccgaatcaggcgcacgggctggcattt
tccgtccagcgggggattgcacatccgccctcccttcagaatatctttaaggagttaaga
gaggacatcggctgtgcggtcccgcagcatgggacgctggaggcgtgggcgcagcagggg
gtctttctgctcaatacggtcctgacggtccgtgaaggtcaggcgcattcgcataaggaa
caggggtgggagcgttttaccgatgcaaccatcaaagcgctcagtgacggccgggagaag
ctcgtctttattctctgggggcggccggcccagatgaaagcgtcgctcatcgacgcctcc
cgccaccatatcatcacctccccgcacccctctccgctctccgcctaccgcggttttttc
ggttcgaaacccttttcgcggaccaattcctacctgcaaagcgcgggaattgctccgatc
gactggtgcctgaatgatgtatga
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integrated database retrieval system
