Tessaracoccus lapidicaptus: TLA_TLA_02424
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Entry
TLA_TLA_02424 CDS
T06975
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TLA_TLA_02424 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tla03021
]
TLA_TLA_02424 (rpoB)
03400 DNA repair and recombination proteins [BR:
tla03400
]
TLA_TLA_02424 (rpoB)
Enzymes [BR:
tla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TLA_TLA_02424 (rpoB)
Transcription machinery [BR:
tla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TLA_TLA_02424 (rpoB)
DNA repair and recombination proteins [BR:
tla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TLA_TLA_02424 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
VEP41224
LinkDB
All DBs
Position
1:2602209..2605682
Genome browser
AA seq
1157 aa
AA seq
DB search
MAASRSALKNTNVVSSTGRISFAKIHEPLEVPNLLDLQIDSYNWLIGNETWMRKVEEQLA
AGRTDVNTRSGLEEIFEEISPIEDFNETMSLSFRDHRFESPKWTIEECKDRDVTYAAPLF
VTAEFVNNDTGEIKSQTVFIGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFEQTADKT
SDKDIFSAKFIPSRGAWLEFEIDKRDMVFVRLDRKRKQNVTVLLKALGWSEDRILEEFGE
FESMRLTLEKDTVKTQDEALLDIYRKLRPGEPPARDAAQALLENYYFNPKRYDLAKVGRY
KINKKLGLDLPFDKQVLTNEDIAAAIRYVASLHERREMLADIPVEADDIDHFGNRRLRTV
GELIQNQLRTGLGRMERVVRDRMTTQDIEAITPQTLINIRPVTAALKEFFGTSQLSQFMD
QNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLIGSLA
SFARVNAFGFIETPYRKVVDGMVTDQIDYLTADEEDRYAIAQANAAVDQGGRLTEDRVLV
RIKHGDVDTIPAADVEYMDVSPRQMVSVATALIPFLEHDDASRALMGANMQRQAVPLLRS
EAPFVGTGMEYRAAVDVGDVTLAKKPGVVTSVTADIIEIANDDATYQSYKLDKFVRSNAG
TCINQRPLVAPGDRVEVGTPLADGPCTDQGELALGKNLLVAFMPWEGLNYEDAIILSQRI
VQDDVLTSIHIEEHEVDARDTKLGAEEITREIPNVSDEMLADLDERGIVRIGAEVSAGDI
LVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIGVRVFNREDDDEL
PPGVNQLVRVHVAQKRKISDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDIVLNPLG
VPSRMNVGQVLENHLGWIAKTGWDVSGVEEAWAERLREVGLGRMDGDAKVATPVFDGATE
AEISGLLANSLTTRDGVRLIDEGGKTRLFDGRSGEPYPEKIGVGYMYMLKLHHLVDDKIH
ARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAWALQELLTIKSDDVPGRVKV
YEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLSDDGRVIDLRESEDDIRSAEDFGI
DLGRRPGSDHFLDVGEV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgctctgcgttgaagaacaccaatgtcgtctcatccaccggccgaatc
tccttcgcgaagattcatgagcctctcgaggtgcccaacctcctggatctgcagatcgac
tcctacaactggctgatcggtaacgagacgtggatgcggaaggtcgaggagcagttggcc
gccggccgcaccgacgtcaacacccggtccgggcttgaggagatctttgaggagatctcg
cccatcgaggacttcaacgagaccatgtcgctgtcgttccgcgatcaccgcttcgagagt
cccaagtggacgatcgaggagtgcaaggaccgcgacgtcacctatgccgccccgctcttc
gtcaccgccgagttcgtcaacaacgacaccggtgagatcaagagccagaccgtgttcatc
ggcgacttcccgctgatgaccgagcgcggcacgttcatcatcaacggcacggagcgcgtc
gtcgtgtcgcagctcgtgcgttcgcccggcgtctacttcgagcagacggccgacaagacc
tccgacaaggacatcttctccgcgaagttcatcccgtcgcgcggcgcgtggctggagttc
gagatcgacaagcgcgacatggtcttcgtccgcctcgatcgcaagcgcaagcagaacgtc
accgtgctgctcaaggcgctgggctggtccgaggaccggatcctcgaggagttcggcgag
ttcgagtccatgcgcctgacgctggagaaggacaccgtcaagacgcaggacgaggccctg
ctcgacatctaccgcaagctgcgcccgggcgaaccgccggcccgcgacgcggcgcaggcg
ctgttggagaactactacttcaaccccaagcgctacgacctggccaaggtcggtcgctac
aagatcaacaagaagctcggcctcgacctgccgttcgacaagcaggtgctcaccaacgag
gacatcgcggcggccatccgctacgtggcgtcgctgcacgagcgccgcgagatgctcgcg
gacatccccgtcgaggccgatgacatcgaccacttcgggaaccgtcgcctccgcacggtc
ggtgagctgatccagaaccagctgcgcaccggcctgggccgcatggagcgcgtcgtccgc
gaccgcatgacgacgcaggacatcgaggccatcacgccgcagaccctgatcaacatccgc
ccggtgaccgcggcgctgaaggagttcttcggcacctcgcagctgtcccagttcatggac
cagaacaacccgctcgccggcctgacgcacaagcgtcgcctgtcggcgctgggccccggt
ggtctgtcccgcgaccgcgccggcatggaggtccgagacgtccacccgtcgcactacggc
cgcatgtgccccatcgagacgcctgaaggcccgaacatcggcctcatcggctcgctggca
tcgttcgcgcgcgtcaacgcgttcgggttcatcgagacgccttaccgcaaggtcgtcgac
ggcatggtcaccgaccagatcgactacctcaccgccgacgaggaggaccgctacgcgatc
gcgcaggccaacgccgccgtcgatcagggcggacgcctcacggaggaccgggtgctggtt
cggatcaagcacggtgacgtcgacaccatcccggcggccgacgtcgagtacatggacgtg
tcgccgcgccagatggtgtcggtggccaccgcgctgatcccgttcctcgagcacgacgac
gcgtcgcgagccctcatgggcgccaacatgcagcgccaggctgtcccgctgctccgcagc
gaggccccgttcgtcggcaccggcatggagtaccgcgcggccgtcgacgtcggcgacgtc
acgctggccaagaagccgggtgtggtgacgtccgtgaccgcggacatcatcgagatcgcc
aacgacgatgccacgtaccagtcgtacaagctggacaagttcgtgcgctccaacgccggc
acgtgcatcaaccagcgcccgctggtcgcccccggtgaccgggtcgaggtcggcaccccg
ctggccgacggcccctgcaccgaccagggcgagctggcgctcggcaagaacctcctcgtg
gcgttcatgccgtgggagggcctcaactacgaggacgccatcatcctgtcgcagcgcatc
gtccaagacgatgtgctcacctcgatccacatcgaggagcacgaggtggacgcccgcgac
accaagctgggcgcggaggagatcacccgcgagatccccaacgtctcggacgagatgctg
gcggacctcgacgagcgcggcatcgtccgcatcggcgccgaggtctcggccggtgacatc
ctcgtcggcaaggtcacgcccaagggcgagaccgagctgacccccgaggagcgcctgctg
cgcgccatcttcggcgagaaggcccgcgaggtccgcgacacctccctcaaggtgccgcac
ggcgagtccggcaccgtcatcggcgtccgcgtgttcaaccgcgaggacgacgacgagctg
ccgcccggcgtgaaccagctggtccgcgtccacgtcgcccagaagcgcaagatctccgac
ggcgacaagctcgccggccgccacggcaacaagggcgtcatctcgaagatcctgccggtg
gaggacatgccgttcctcgaggacggcacccccgtcgacatcgtgctcaacccgctaggc
gtgccgtcgcgaatgaacgtcggccaggtgctggagaaccacctcgggtggatcgccaag
accggctgggacgtcagcggcgtcgaagaggcatgggccgagcgcctgcgcgaggtcggc
ctcggccgcatggacggcgacgcgaaggtggcgacccccgtcttcgacggtgccaccgag
gcggagatcagcggtctgctggcgaactcgctgacgacgcgtgacggcgtgcgcctgatc
gacgagggcggcaagacccggctcttcgacggccgctccggcgagccttacccggagaag
atcggcgtcggctacatgtacatgctgaagctgcaccacctcgtcgacgacaagatccac
gcccgttcgaccggcccgtactcgatgatcacccagcagccgctgggcggtaaggcgcag
ttcggtggccagcgcttcggtgagatggaggtgtgggccctggaggcgtacggcgcggct
tgggcgctgcaggagctcctgaccatcaagtcggacgacgtccccggccgcgtcaaggtc
tacgaggccatcgtcaagggcgagaacatccccgaaccgggcatccccgagtcgttcaag
gtgctcgtcaaggagatgaagtcgctgtgcctgaacgtcgaggtgctctccgacgacggc
cgggtcatcgacctgcgcgagtccgaggacgacatccgctccgcggaggacttcggcatc
gacctcggtcggcgccccggcagcgaccacttcctggacgtcggagaggtgtag
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