Pseudothermotoga lettingae: Tlet_0477
Help
Entry
Tlet_0477 CDS
T00618
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tle
Pseudothermotoga lettingae
Pathway
tle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tlet_0477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tle03021
]
Tlet_0477
03400 DNA repair and recombination proteins [BR:
tle03400
]
Tlet_0477
Enzymes [BR:
tle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tlet_0477
Transcription machinery [BR:
tle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tlet_0477
DNA repair and recombination proteins [BR:
tle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tlet_0477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Spore_Cse60
Motif
Other DBs
NCBI-ProteinID:
ABV33044
UniProt:
A8F4G0
LinkDB
All DBs
Position
501843..505361
Genome browser
AA seq
1172 aa
AA seq
DB search
MRTVCYGKRERLTFGRIHDAVKVPNLISIQIDSYKDFLENGLIEVLKKFSPITSQPHKGD
LKKGEKGFVLEFVSTKVGQPNAPVEECKQKGLTYTVPVYTTVRITDVNTGEMREEEAFLG
SIPHMTENGTFIINGAERVIVSQLVRAPGVYFVDEIPKTQVVSPIYVAHFLPVRGAWLEL
LYYSADNMFYARIDRKRRINLFLLFKALGFTDDLEILDLFPDPIDADDEYTMEKAVGSII
LHDVVLDGKKIVERGGVLTKAASQAILESKIATVVRAHPAAQKTLEKMVDTYGEVDSSKA
YVEIFRKLKPGEIPRVNTAKAYLTSLYFSTERFELSDVGRYKINKRLTQAYRRYLAQVKG
LPEEEVESVEYNPEDPVLTPMDIVLASRYLLDVSKNPEIMDTKDHLGNKRVRTVGELIKL
EFERAFARAQRLIQERLTLYASLDKISIQSLINVKTIIAGINQFFATSPLSQFMEQVNPL
AELTHKRRLTAVGPGGLKRERARFEVRDVHHSHYGRMCPIETPEGANIGLITSLAVYANI
DKFGFLTTPYRKVVNGVVTSEIVYLTADEEEHYNIAPCTIKIDKDGRILDERVPVRFMER
LQFVEKNKVQFMDVSTKQIVSVSTSLIPFLEHDDANRALMGSNMQRQAVPLVKPEAPFVA
TGVEYDAALYSGYVVQAKYSGRVKKVDSRKIVIERMDENGKPVLKNGKPVLDEYRLMKFM
RTNQDTTVNQRPIVDIGDIVKAGDVIADGPATDMGELALGKNVLVAFMPWEGYNFEDAIL
VSEELLEEDTFTSIHIEVYETQARDTRLGPEEITVDIPNVSKEALRNLDENGIVRVGAYV
GPQDILVGKVTPKGEGETTPEEKIIRSVFGERGKDVKDTSLRLPHGTDGRVIDVKVFDKD
EETDLGAGVNKLVKVYVACRKTLEVGDKLAGRHGNKGVVSKILPKEDMPFLPDGTPVQLV
LSPLGVPSRMNVGQILETHLGWLAKLTRNWFATPVFDGAKENEILPWLYEERRAVGLEEG
DSDNEPSGKVVLRDGRTGESFAEPIVVGYIYMMKLVHIAKDKIHARSTGPYSLIHQQPLG
GKAQFGGQRFGEMEVWALEAHGAAHTLNEMLTIKSDDIKGRNEVYKAILKGKNIPEPGIP
ESFRVLIKELRGLALDIRVYDENGNEIDIDRV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgtttgttacgggaagagggaacgtctcacctttggccgcatccatgatgct
gtgaaagttccaaatctcatatcaattcaaattgattcttacaaagattttcttgagaat
ggattaatagaagtcctcaagaaattctctccaattacttctcaacctcacaaaggtgat
ttgaaaaaaggtgaaaaaggattcgtcttggaatttgtttcaacaaaagtgggacaacca
aacgcgcccgttgaagaatgcaaacaaaaagggcttacttacactgtcccggtttacacc
acagtacgtattactgatgtaaatactggtgagatgagagaagaagaggctttccttggt
tcgataccgcacatgactgaaaatggaacatttataattaacggtgcggaaagagttatt
gtcagtcaacttgtgagagcgcccggtgtttactttgttgatgaaattccgaaaactcag
gttgtatctccaatttatgttgctcattttctacctgtaagaggtgcgtggctggaatta
ctctactacagcgcagacaatatgttttatgcgagaattgacagaaaaagacgtataaat
ctctttttgctgtttaaagcattggggttcactgacgaccttgaaattttggacctcttt
cctgatccgattgatgctgacgatgaatacactatggaaaaagctgttggatcaataatt
ctccatgatgttgttttagatggaaagaaaattgtagaaagaggtggggttttaactaag
gcagcatcacaggctattttagaatccaaaatagcaaccgtagtgagagcgcatcctgct
gcccaaaagaccctggaaaagatggtagatacctatggggaagttgattcttccaaagcg
tacgtagagatttttagaaagttgaagccgggagagattcccagggttaacacagcaaaa
gcatatttgacgagtttatatttcagcaccgagagatttgaactgtctgatgttggaaga
tacaagataaacaagagattgactcaggcttacagaagatatctcgctcaagttaaagga
cttccagaagaagaagtcgaatcagtggaatataatcctgaagatcctgttttaacacct
atggatatagtacttgcaagtagatatttgcttgatgtaagtaaaaatccggaaataatg
gacacaaaagaccatcttggaaacaaaagggtcagaactgtcggtgaattaataaaattg
gagtttgaaagagcctttgctcgtgctcagagattaattcaagaacgcttgacgctttat
gcttcactcgacaagatatctattcagagcctgataaatgtaaaaacgataatagctggt
atcaatcaattttttgcaaccagtccgctatcccagtttatggaacaggttaatccactt
gccgaattaacacataaaaggagattaactgcagtgggcccaggcggattgaaaagagag
cgagctcgattcgaagttagggacgtgcatcattctcattatggaaggatgtgcccaata
gaaacacccgaaggtgcaaacataggtcttataacttcattagcggtgtatgcgaatatt
gacaaatttggttttttaaccactccatatagaaaagttgtcaatggggttgttaccagt
gaaatcgtttatctgacagccgatgaagaagaacattacaatatagctccgtgcacaatc
aagattgacaaagatggcagaatacttgatgaaagagttcctgtgcgattcatggaaaga
ttgcagtttgttgagaaaaataaagtccaattcatggatgtttcaacaaagcaaatagtg
agcgtttcaacatcacttattccattcctcgagcatgatgatgcaaatagagctttaatg
ggatcaaatatgcagagacaagcagttcctcttgtgaaacccgaagctccgtttgttgct
actggtgtcgagtatgatgcggcactttactctggttatgttgttcaagccaaatacagc
ggtagagttaagaaagttgattcaagaaaaatagttattgaaagaatggatgaaaatggt
aaacctgttttgaaaaatggtaaacctgttctggatgaatacagattaatgaaattcatg
agaacaaatcaagatacaacggtaaatcaacgtccaatagtagatattggagacatagta
aaggcaggggacgtgattgcagatggtccggcaactgatatgggagaactcgcactcggg
aaaaatgtactggttgctttcatgccatgggaagggtacaatttcgaagatgcgatattg
gtaagcgaagaacttttggaagaggacaccttcacttcaattcacatagaagtttacgag
actcaggccagagatacaagacttggaccagaagaaataacagttgatattcccaacgtg
agtaaagaagcgctgagaaacctcgatgaaaatggaatagtcagggtaggtgcttatgtt
ggaccccaggatattctggttggtaaggtaacaccaaaaggtgaaggtgaaactacaccc
gaggagaagatcataagatctgtttttggcgaacgaggaaaagatgttaaagatacttca
ctcaggcttcctcatggaaccgatggcagagttatagatgttaaagtgttcgataaagac
gaagaaacagatcttggtgcaggggtcaacaaactggttaaggtttatgtcgcttgtcga
aagactctcgaagttggagacaaacttgctggaagacatggaaacaaaggtgtggtatca
aaaattcttccaaaagaagatatgccatttttacccgatggtacgcctgttcagctggtt
ttgagcccacttggagtgccatcaagaatgaatgttggtcagatacttgaaacacatctt
ggttggcttgctaaacttacgcgaaactggtttgcaacacctgtctttgatggtgccaag
gaaaatgagatattgccgtggttatatgaggaaagacgggcagttggtcttgaagaagga
gatagtgataatgaaccttcaggcaaagttgtgctgagggatggaagaactggtgagtca
tttgcagagccaattgtcgttggttatatatatatgatgaagctggttcatattgcgaag
gacaagatacatgcccgttcaacaggaccatattctctaatacatcaacagcctcttgga
ggtaaggcacagtttggtggccaaagatttggtgaaatggaagtttgggctctggaggca
catggagctgcgcatacgctcaatgaaatgctcaccattaaatctgatgatataaaaggc
aggaacgaggtttacaaggctatcctcaaaggcaagaatataccagaacccggtatacca
gaaagttttcgtgttttgatcaaagagttaagaggacttgctcttgatatcagggtgtac
gacgagaatggcaacgaaattgatattgaccgggtttga
DBGET
integrated database retrieval system
