Temnothorax longispinosus: 139815963
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Entry
139815963 CDS
T10889
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
tln Temnothorax longispinosus
Pathway
tln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139815963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tln03019
]
139815963
Messenger RNA biogenesis [BR:
tln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139815963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
ARM_TT21_N
DUF7158
Motif
Other DBs
NCBI-GeneID:
139815963
NCBI-ProteinID:
XP_071639350
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Position
7:complement(5081087..5084843)
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AA seq
827 aa
AA seq
DB search
MGDTGHADMLPADTTRLTADSGFSELLRSAEQLSAAVEGNEDLPQVDRNLRQILEASNEL
WSRVTQTGTQDNEAQAHVLLGSRGIDLSQISQKLNSLSARRTFEPLDPIADTDIVSYLRN
EKENAILSIIEQVHKDTFELTRAQQMEHMLGEWKQMRFEIINAMTAPSGELVDLRGAPQR
TKLAGSMVSGLSNIEVAYVKELQTYNDHVLRGVTRPSLFNAFSRASESFNDKKIVDLWQM
VKCMVDIPPTPRGDQIKSRSSSVIEQRIVSQAKKYLENRYRDFMNSIINENLMQAKRGGV
PGTIPLVKSFVGVKVQNLRDLEDAMVEHKPLWPLVYYCMRAGDYKAALQCLNQCSIEFPE
FKTALEEACDDPQHHPSSRAESILKLHYRKQVRSVTDPYKRAAYCVLVPCEPDDLHSEVI
STADDYLWLKLCQVRDQADVENKLTLDYLQTTISEIYGETYYHAHEQPFLYFSMLFLTGQ
FEAAIEFLATGAGARHLPHAVHLAAAMHEHNLLAVSQSVLAPLISVDPADKPPAKRLNFA
RLILLYVKRFESSDPKEGLHYLFLLRCMKDPYDRNMFAASAAEMVVDASPANRVLLVGKL
DKDRRLPGILDQFQINMDDVINICAETLYRKGLLEDAVMMYDLARNHEKVLSLMCTLLTQ
VVSQKGPPGSLRARLQVTAMDISTRYKDIAIQAPSEVVSSFYTLRDLMVFFDQFHNEQYQ
SALRTIADSKMLPLQVKEVDERVNALRRVSPEVAGTLADVLLATMTILYRQYQKLRSVEP
GDKIAREQQLHDLREQARALTSFAGTLPYRMPNETNSKLVQMEILMH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataccggtcacgcggatatgttgcccgccgacacgacgcgacttaccgccgac
tccggcttcagcgaattgctgagatcggcggagcagctgtccgcagccgtcgagggaaac
gaggatctgccgcaggtcgacagaaatctgcgacagatattggaggcgtccaacgagctg
tggtctcgtgtcacgcaaacgggcacgcaggacaatgaggcgcaagctcatgtcttacta
ggctcccgaggaatagatctgtctcaaatctcacagaagttaaattcgctcagtgcaagg
cgtacgtttgagcccctagatcctatcgcagacaccgacattgtcagttatctcaggaat
gaaaaggagaatgcaattctttccatcatcgaacaagtccacaaagacacatttgagctt
accagagctcaacaaatggaacatatgctgggtgaatggaagcaaatgcgttttgagata
ataaacgccatgaccgcgccgtccggcgagttagttgatttacgcggtgctccgcagcgt
acaaaactagccggttcgatggttagcggtctctccaacatagaagtcgcctacgtgaag
gaattgcagacttataacgatcatgtgctgagaggtgtaacgcggcccagcctgtttaac
gcgttctctagagcctccgagtcctttaacgacaagaagatcgtggatctgtggcaaatg
gtgaagtgtatggttgatattccgccgacacccagaggagatcaaattaaatccagaagc
agctctgtgattgaacagagaatcgtctcgcaagctaaaaagtatctagaaaaccgatac
agagatttcatgaactccataatcaacgagaatctgatgcaagcgaaacgaggtggcgtt
ccaggcactatacctttggtcaagagcttcgtgggtgtcaaagtgcaaaatctgagggat
ctggaagatgctatggtagaacacaagccgttgtggccgttagtgtactactgcatgcga
gctggggactataaagccgccctgcagtgcttgaatcaatgcagtatagaatttccggaa
tttaaaacggccctcgaggaagcctgcgacgatccacaacatcatccgagcagtcgcgcc
gagtccatcctgaagctgcactacaggaagcaagtacgatccgtcaccgatccgtacaag
agagcggcgtattgtgtcttggttccttgcgagccggatgatttacactccgaagtgata
tccacggccgacgattatttgtggctgaagttgtgccaagtgagagatcaggcggacgtt
gagaataaactgacgttggattatctacagactacaatttcagaaatatatggagaaact
tattatcacgcgcacgaacagccatttttgtacttttcgatgctgttcttgaccgggcag
tttgaagcagcgatagaattcttagccacaggcgctggagcgagacatttgccacatgct
gttcatctggccgccgctatgcacgaacacaatttgttggctgtcagtcaaagcgtttta
gcgcctctgataagcgtggatcccgccgataagccgccagcgaagagactgaatttcgct
agactgatattgttgtatgttaaaagatttgaatcatcagacccgaaagaaggcctccat
tatttatttttattgagatgtatgaaggacccgtatgatcgtaatatgttcgctgcgtct
gccgcggaaatggtagtagatgcttctcctgcgaaccgcgttttattggtcggaaagctc
gacaaagatcgtagacttccagggatcttggatcaattccagatcaatatggacgacgtg
ataaatatatgtgccgaaacattgtacaggaaaggtctgctggaagatgcggtcatgatg
tacgatttagctagaaatcacgagaaggttcttagtttgatgtgcacgctgttgacgcaa
gttgttagccaaaaaggaccgcccggatctctcagagcacggttacaagtcacagccatg
gatattagtacaaggtataaagacatcgcaatccaagcaccttcggaagtggtgtcttct
ttctatactttgagggatcttatggttttcttcgatcaattccacaatgaacaatatcag
agcgcacttaggacaattgcggattcgaagatgttgcctcttcaagtaaaagaagtcgac
gaaagagtgaacgctttacgtcgggtgtcgcccgaagtggctggcacattagccgatgtt
cttctagccactatgacaatattgtatcgtcagtatcagaaattgcgatcggtggaacca
ggcgataaaatcgcgagggagcagcagttgcacgatctccgagagcaagcccgagcgtta
acgagtttcgcgggaacgttgccatatcgtatgccaaacgagacaaacagcaaacttgta
caaatggagattctaatgcattag
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