Thiothrix litoralis: J9253_06880
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Entry
J9253_06880 CDS
T07754
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tlo
Thiothrix litoralis
Pathway
tlo01501
beta-Lactam resistance
tlo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9253_06880
01503 Cationic antimicrobial peptide (CAMP) resistance
J9253_06880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlo02000
]
J9253_06880
01504 Antimicrobial resistance genes [BR:
tlo01504
]
J9253_06880
Transporters [BR:
tlo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J9253_06880
Antimicrobial resistance genes [BR:
tlo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J9253_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTR47641
UniProt:
A0ABX7WWH7
LinkDB
All DBs
Position
complement(1430089..1433349)
Genome browser
AA seq
1086 aa
AA seq
DB search
MNDFPKDADPAEIEHPNLGLAGVTAKAFITSPLSLLLLLAFFAVGVLGMWVTPRQEDPQI
SVPMVDIFVRYPGASAQEVENLISRPMESILSEMTGVDHVYSVSMHEQSMVTVQFIVGQE
LESSLVKLYDKLASNQDKIPQQASTPSVKPKGADDVPLVTLTLWSNKVEDTNLRLIGLDV
LQSLREVENTSQSFMVEGRHEALKVEILPERLATFGVSLEQVANAIRMANSERSTGTVEP
NQKVFKIYSGIFLNSAADIQRLIVTVAGGRPVYVRDVATVTEEAAEADHAVAYFTGPAAQ
DVKETADNAAAVTLAIAKKKNTNGVDVANAILAKLEVLKGRIIPDNVHVEVTRNYGATAK
EKVDELIFKLFVATGIVTLLVWFFLGWRAATVVLIVIPAVITTTVFAAWLMGMTIDRVSL
FALIFSIGILVDDAIVVVENIYRRWLMDSSTKISIAVDAVREVGNPTILATGTVIAALLP
MGFVSGMMGPYMRPIPVLGSVAMVISLFAAFAFTPWLTNRFRPSLKSLQAAAEKEHKQAA
MMEKFFRGVITPLVDSRFKGFTFLVGIIATFFVFMLMFYPFTGVRVKMLPLDNKPEFNVV
VNMPEGTAMPVTANLVYQLAGKLKTLPEVTALQTYTGTASPFNFNGLVRHYYLRQQPWQA
DIQVQLSPKHDRKRSSHEIAVEAREILQPLLGNTGAKLQVVEMPPGPPVLQSVVAEVYGP
DANTRRQVAADLTRFFGQAENLGDVDNLMEDDHEVLHFIVDSDKAQRNGITAEAINRTLE
MAMGGYVLGDIKKNALIDPTRIVMQIPLEARSQIYRLSQLPVTNPTGQAVPLQELGTFVF
EKQDKPIYRKDLRPVEFVTAETTGRLAAPVYGQSQVENLLKAANNGEGYRSPDGTLLHEQ
AYWLKTPQEVESKSAFEWGGEWTVTWETFRDMGIAFAAALVLIYMLIVAQFGNFILPAII
MAPIPLTLIGIVPGHWLMNAEFTATSMIGFIALAGIIVRNSILLVDFARGEVAKGMPVLD
AVIHSCEARTRPILITALALFGGSMVILSDPIFQGMAVSLIFGGAVATLLTLLIIPLGCI
SAGKSL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttccccaaagatgccgatccggctgaaatagagcaccccaatttggggttg
gcaggcgttaccgccaaagcctttattacttcgccgctctccttgttgttgctactggct
ttttttgccgtgggtgtgttggggatgtgggtcacgccgcgtcaggaagacccacaaata
tccgtgccgatggtggacatttttgtgcgctatcccggcgcgtcggcgcaggaagtcgag
aacctgatttcccgtccgatggaaagtatcctctcggaaatgactggggtggatcacgtt
tactcagtgtccatgcatgaacagtcgatggtcacggtacagtttatcgtgggtcaagaa
ctggaatcatcattggtcaagctgtacgacaagttggcctccaatcaagacaagattccc
cagcaagcctcaacccccagcgtgaaacccaaaggggcggatgatgtcccgctggtcacg
ctgaccttgtggtcgaataaagttgaggataccaacctgaggctgattgggttggatgtc
ctgcaaagcctgcgcgaagtggaaaacaccagccagagtttcatggtagaaggccgtcat
gaagcgttgaaggttgaaatattgcccgaacgtttggcgacctttggggtatcgctggaa
caggtcgccaatgctatccgcatggccaattcggaacgcagtaccggcacggttgaacct
aaccagaaagtcttcaagatctacagcggtattttcctgaattctgccgccgatattcag
cgtctgattgtgacggttgcaggggggaggccggtctatgtgcgtgatgtcgcgacagtg
acggaggaagcggccgaagcagaccatgccgttgcttactttactggccctgcggcacag
gatgttaaggaaacagccgataatgccgctgcggtcacgctggcgattgccaagaaaaag
aacaccaatggtgtcgatgtagccaatgcgatactggcgaaactggaagtgctcaaaggc
cggattattcccgacaatgtgcatgtcgaagtgacccgcaattatggggcaaccgcgaaa
gaaaaggtcgatgaactgatcttcaagctgtttgttgcgactggtatcgtgacgctgctg
gtgtggttcttcctcggttggcgggcggcgacggtggtgctgatcgtgattccggcggtg
attaccaccacggtgtttgcggcttggctgatgggcatgacgattgaccgggtgagtctg
tttgcgctgatcttctccatcggcattctggtcgatgacgccattgtggtagtggaaaat
atttaccggcgctggttgatggacagcagtaccaagatcagtattgcggtcgatgcagtg
cgtgaggtaggcaacccgactattctggcaacgggcacggtgattgcagctttactgccg
atgggctttgtcagcgggatgatggggccttatatgcgcccgattccggtactgggttcg
gtggcgatggtgatttccttgtttgcagcgtttgcctttacgccgtggctgaccaatcgc
tttagaccttccctgaaaagcttgcaggcggcggcggagaaagagcacaagcaagcggcg
atgatggaaaagttcttccgtggtgttatcacacccttggttgatagccgttttaagggc
tttacctttctagtgggcattatcgcgaccttcttcgtgtttatgctgatgttctaccca
ttcacgggtgtcagggtgaaaatgttaccgctggataacaagccggaattcaatgtggtg
gtcaatatgccggaaggcacggcaatgcccgtgacggctaatctggtgtaccaactggcg
ggcaaactcaagaccttgccggaagtgactgctttgcaaacctatactggcacggcttcc
ccgttcaatttcaacggcttggtgcgccactactatttacgccagcaaccttggcaggcg
gatatacaggtacagctttcccccaaacacgaccgtaagcgcagcagccacgagattgcg
gtggaggcgcgggaaatcctacaacctttgctgggcaatactggcgcgaaacttcaggtt
gtcgaaatgccaccgggccccccggtgctgcaatccgtagtcgccgaggtttatgggccg
gatgcgaatacccgccgtcaggtcgcggctgatttgactcgcttctttgggcaggccgaa
aaccttggggacgtggataacttgatggaagacgatcatgaggtgctgcacttcatcgtg
gattcggacaaggcgcaacgtaatggcattacggctgaagcgatcaatcgcaccctggaa
atggcgatgggtggttatgtgttgggtgacatcaagaaaaacgccttgatcgacccgacc
cgtattgtgatgcagattccgttggaagcccgctcgcaaatttaccgcttgtcacaactg
cccgtgaccaacccgaccggacaggctgtaccgttgcaggaattaggcactttcgtgttc
gagaagcaggacaagccgatttaccgcaaggatttgcgcccggttgaatttgtgacggct
gaaaccaccgggcgtttggctgcaccggtttacgggcaaagtcaggtagaaaatctgctg
aaggctgccaacaatggcgaaggctaccgcagcccggatggcacgttgttacatgaacag
gcttactggctcaagactccgcaagaggtggaaagtaaatccgctttcgagtggggcggg
gaatggacagtaacgtgggaaaccttccgcgatatgggaattgcgtttgcggccgcgctg
gtattgatttatatgctgattgtggcgcagtttggtaatttcatcctgcctgccatcatc
atggcaccgattccgctgaccttgatcggcattgtgccggggcattggctgatgaatgca
gagtttaccgcaacgtcgatgatcggctttattgcgctggcggggattattgtgcgcaat
tccatcctgctggtggactttgcccgaggtgaagtggctaaaggtatgccggtgttggat
gcggttatccattcctgtgaagcgcgtacccgaccgattttaattacggcgctggccttg
tttggtggctcgatggtgattctctctgacccgatttttcaggggatggcggtgtcactg
atctttggcggggctgtggcgactttattgaccctgctgattattccgctgggttgcatc
agtgccggaaagtcactgtga
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