Thiothrix litoralis: J9253_18770
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Entry
J9253_18770 CDS
T07754
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
tlo
Thiothrix litoralis
Pathway
tlo02024
Quorum sensing
tlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9253_18770 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9253_18770 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlo03019
]
J9253_18770 (hfq)
03036 Chromosome and associated proteins [BR:
tlo03036
]
J9253_18770 (hfq)
Messenger RNA biogenesis [BR:
tlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J9253_18770 (hfq)
Chromosome and associated proteins [BR:
tlo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
J9253_18770 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QTR46001
UniProt:
A0ABX7WQ50
LinkDB
All DBs
Position
complement(3871953..3872183)
Genome browser
AA seq
76 aa
AA seq
DB search
MSKGHTLQEPFLNALRKERIPVSIYLVNGIKLQGHVESFDQFVVLLGNTVSQLVYKHAIS
TIVPARPIKLALAPEE
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagggcacacattacaagaacccttccttaatgctctgagaaaggaacggatt
ccagtctccatttatttggtcaacggcatcaaattacaggggcatgtcgagtcatttgac
caattcgttgtactattggggaatactgttagccaattagtctacaaacatgccatttcc
acgatcgtgcctgctcgcccgatcaaactggcgctggctcccgaagaataa
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