Thioflavicoccus mobilis: Thimo_2617
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Entry
Thimo_2617 CDS
T02397
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thimo_2617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2617
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thimo_2617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_2
HHH_5
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AGA91340
UniProt:
L0H131
LinkDB
All DBs
Position
complement(2896540..2898360)
Genome browser
AA seq
606 aa
AA seq
DB search
MTTLDPRALLKRIPTAPGVYRLLDAGGQVLYVGKAKSLRHRVSSYFSRALNRRQQVMMDQ
VADVEVTVTGTEGEALLLESNLIKASRPRFNVVLRDDKSYPYIYLSSQDPFPRLAFYRGS
RKGPGRYFGPYPSASAVRETLQLIQKLFPVRQCEDSFFRNRSRPCLQYQIKRCSGPCVGF
IDAADYAEDVACTVKFLEGRADEVVRELAGEMDRASAALAFERAAVLRDRIQTLQRIQQR
QYVTGEGGDLDIVAVAQGGGRHCVLVFFIRAGRNLGSKTFFPQAPSDTDEAALLSGFLAQ
FYADKPIPGEIIATTAPEERELLEQALGQRAGKRVSIKTRVRAERARWLDLARGNAQVAL
QSRLGSEADYLRRLDALRGALRLAERPQRIECFDVSHTGGERTVASCVVFDGEGPCKSGY
RRFNIEGVASGDDYAAMHQALTRRYTRIKQGEFPFPDLLLIDGGRGQVGAVAEVLQELGA
GGVTLVGVAKGADRRPGQEQLWLFGCKAPIILAANSPAMHLIQQIRDEAHRFAITGHRQR
RGKARTQSILEGIRGIGPKRRQRLLRQFGGLHGLSRAGVEDIARIEGISSQLAREIYDAF
HRDGAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgactctcgatcctcgcgccctcctcaaacggatcccgaccgcgcccggtgtctat
cgccttctcgacgccggtgggcaggtactctacgtcggcaaggcaaagagcctgcgccat
cgggtgagcagctacttcagtcgagcgctcaaccgtcgccaacaggtcatgatggatcag
gtcgccgatgtcgaggtcacggtgaccggcaccgagggcgaggccctcctgctcgagagc
aatctgatcaaggcgtcgcgcccgcgcttcaacgtcgtgttgcgcgacgacaagagctat
ccctacatttatctatcgagccaagaccctttcccgcgcttggccttctatcgcggctcg
cgcaagggcccgggccgctacttcggcccctatccgagcgcttccgcggtgcgcgagacg
ctccagctgatccagaagctctttccggtccgccagtgcgaggacagcttcttccgcaat
cgctcgcgcccctgtctgcaataccagatcaagcgctgcagcggtccgtgcgtcgggttc
atcgacgcggcggactacgccgaggatgtcgcatgcacggtgaagtttctcgaggggcgt
gccgacgaggtcgtccgggagctcgccggcgagatggaccgggccagtgccgccctggcc
ttcgagcgggcggcggtgttgcgcgatcgcatccagaccctgcaacggatccagcagcgc
cagtacgtgacaggggaaggcggcgacctcgacatcgtcgccgtcgcccagggcgggggg
cgtcattgcgtactggtgttcttcatccgcgccgggcgcaatctcggcagcaagaccttt
ttcccgcaagccccgtccgataccgacgaggcggccctgctctcgggttttctcgcccag
ttctacgcggacaagccgatccccggcgagatcatcgcgaccaccgcccccgaggaacgg
gaactgctcgaacaggcgcttggccagcgggctggcaagcgggtctcgatcaagactcgc
gtacgcgccgagcgggcccgctggctggaccttgcccgcggcaacgcccaagtggcgctg
caatcgcggctcggtagcgaggccgactacctcaggcgcctcgacgcgctacgcggtgcg
ttgcgtcttgccgaacgcccgcagcgaatcgagtgcttcgatgtcagccacacgggcggc
gagcgcaccgtggcctcttgcgtggtcttcgacggtgaggggccctgcaagtccggctat
cgccgcttcaacatcgagggggtagcatccggcgacgactatgcggcgatgcaccaggcc
ctgaccaggcgatacacccggatcaagcagggcgagtttccgtttccggacctcctcttg
atcgacggcggccgcggtcaggtcggcgctgtcgccgaggtcctgcaagagctcggggcc
ggcggggtcaccctggtcggggtcgccaagggagccgaccgccgtcccggccaagagcag
ctttggttgttcggttgcaaggccccaattatactggcggccaattcccccgccatgcac
ctgatccagcagatccgcgacgaggcccatcgcttcgccatcaccggccatcggcagcgc
cggggcaaggcacgcacgcagtctatccttgaaggtattcgaggcatcggtccgaagcgg
cgccaacgtctgttgcgtcaattcggcggcttgcacggcctgagccgggccggcgtcgag
gatatcgcgcgcatcgaggggatcagctcgcagctggcgcgagagatctacgacgccttt
catcgtgacggggccgagtga
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