KEGG   Legionella micdadei: LMI_0008
Entry
LMI_0008          CDS       T03810                                 
Symbol
hfq
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
tmc  Legionella micdadei
Pathway
tmc02024  Quorum sensing
tmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMI_0008 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMI_0008 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmc03019]
    LMI_0008 (hfq)
   03036 Chromosome and associated proteins [BR:tmc03036]
    LMI_0008 (hfq)
Messenger RNA biogenesis [BR:tmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LMI_0008 (hfq)
Chromosome and associated proteins [BR:tmc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LMI_0008 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: CEG59383
UniProt: A0A098GAC5
LinkDB
Position
I:10312..10557
AA seq 81 aa
MIKNHLLQDPFLNELRKEKVPVSVFLVNGIKLHGVVDAFDQYVVMLKNSVTQMVYKHAIS
TVVPSRMVKLPTGDEEGNMAD
NT seq 246 nt   +upstreamnt  +downstreamnt
atgattaaaaatcatctcttacaagatccctttctaaatgaattacgtaaagaaaaggtt
ccagtatccgtgtttttggttaatggcattaaattacacggtgtggttgatgcttttgat
caatacgtagtgatgcttaaaaattcagtgacgcaaatggtttataaacatgcaatatca
accgttgtgccatcacgtatggttaagttgcccactggtgacgaagagggaaatatggca
gactag

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