Thalassovita mediterranea: KUV46_06370
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Entry
KUV46_06370 CDS
T07443
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tmd
Thalassovita mediterranea
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_06370 (addA)
Enzymes [BR:
tmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUV46_06370 (addA)
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KUV46_06370 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
AAA_30
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYJ02011
LinkDB
All DBs
Position
complement(1289178..1292687)
Genome browser
AA seq
1169 aa
AA seq
DB search
MTDVIDFPSPYARAQKAQADAALPDRSAWVEAHAGSGKTKVLIDRVARLLLRRDGGRPGA
APDTILCVTYTKAAANEMLGRLFRTLGSWSVADDATLRDKLAELEHRPADTYEASDLDAA
RALFAQALETPGGLRIETIHAFCARILRRFPLEAHVSPGFTEIEDREADELWTDALREQI
LHAADTNPDALAALSEAGGGLGASVILSALRSVTTDLTGRDPETLKADVKAALNAPDESA
AELVENAMGCDLPRADIQSIVSILSGETSLKKTDADLLDKLVDCLSARPAEDRFETYCSL
FLTQAGDWKKSNPYTKAIGDLCPEATALYQMKDGDGSEAFRIRNLLERLKARRAFETTAA
LIDVGLPVLSGYASGKRARAALDFDDLIERTKSLLTAPGIAEWVLYKLDGGLNHILLDEA
QDTSPSQWVLINALVTEFRAGMGAERAVDPRTQFTVGDKKQSIYSFQGADPERFLQEKQA
FIGAEESRHGQANLPDMTMSFRSTPEVLGFVDAVFNQDSFAGDPFSDMPPDEADALTHVA
KRSDEAGRVDLWPITPHTEEEEGDPWDAPLDHISESSPKNKLAKQVAAEIRRMVDAGEPV
WRKGEPQGARPEDFLILVRKRGALFNALIRALKDEKLPVAGADRLVLLDHIGVQDCLNLI
RFALFPSDDLTLAEILRGPFCGLIDDDNHLFPLAYKRKNESLWDRLQAATDTVFAPARTF
CEDLLAHRHLPAFDFLSRALTTRREDGLSGWDRLIQRLGEPARDPVSALIDRALGYDMGE
AASLQLFLAEIESDTSQLKRDLAEANGEIRVMTVHGAKGLQAPIVILPDTTGAEKADTNG
LFMLEGGIPVYSKRASEDPPVIAARRLARQTAQARESRRLLYVALTRAEDRLIIAGAHHG
SKSGAGYGDTSWYALCRQGMLSLTGGDGGDADETLTYGEVQPAVTPDSGASAAPPAAPLW
TKQQAPGTGPTTRIRAPSRLLTDTAPVSKPFGPARAAALKRGKLIHTLLQYLPELAPDAR
EAAARTWLDRHAELDDTARAEILAVTLRTLSDDSFSHVFATGGRSEAAIVGEIETASGAT
IINGRVDRLVVSDTEVLIIDYKTDRPAPARVEDVDASYIAQMAAYTHILSETWPRRTVRA
GLLYTDGPVLFELPTSLLQNSLERLAGRL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtgatcgactttccatccccctatgcccgcgcgcagaaggcgcaggccgac
gccgccctgccggaccgctccgcctgggtcgaggcacatgcaggctccggcaagaccaag
gtcctgatcgaccgcgtcgcgcgcctgctccttcgccgcgatggcggccgccccggcgcc
gcgccagacacgatcctctgcgtcacctacaccaaggccgccgcgaacgagatgctcggc
cgcctcttccgcacgctcggcagctggtccgtcgccgacgatgcgaccttgcgcgacaag
cttgccgagctcgagcaccgcccggctgacacctacgaggccagcgacctcgacgccgcc
cgcgccctgtttgcgcaggccctcgaaacacccggcggtctccgcatcgagaccatccac
gctttttgcgcgcgcatcctccgccgtttcccgctggaagcccacgtctccccgggtttc
accgagattgaggaccgcgaggctgacgaactctggaccgacgcgctgcgtgagcagatc
ctccacgccgctgacacgaatccagacgccctcgccgccctctccgaagctggcggcggc
ctcggcgcatcggtcattctctcagcgctgcgcagcgtcaccacagacctcaccggccgc
gaccccgaaacgctgaaagccgacgtcaaagcagccctcaatgccccggatgaaagcgcc
gccgaactcgtcgagaacgcgatgggctgcgacctcccgcgcgccgacatccagtccatc
gtctccatcctctccggcgagaccagcctgaaaaagaccgacgccgacctcctggacaag
ctggtcgactgcctctcagcccgccccgctgaagaccggttcgagacttattgcagcctc
ttcctcacccaggctggcgactggaaaaagtccaacccctacaccaaggcgatcggcgac
ctctgccccgaagccaccgccctctaccagatgaaggacggcgacggcagcgaagctttc
cgcattcgcaacctgctggagcgcctgaaagcccgccgcgcctttgagacaaccgccgcg
ctgatcgatgtcggactgcccgtcctctccggctacgcatcaggaaagcgcgcccgcgcc
gccctcgatttcgatgacctgatcgagcgcaccaaaagcctcctcaccgcccccggcatt
gccgaatgggtgctctacaagctcgatggcgggctcaaccacatcctcctcgatgaggcg
caggacaccagccccagccagtgggtgctgatcaacgccctcgtgaccgagtttcgcgcc
ggaatgggtgcagagcgcgccgtcgacccgcgcacccagttcactgtcggcgacaagaaa
cagtccatctactccttccagggcgccgaccctgaacgcttcctgcaggagaagcaggcc
ttcatcggcgccgaagagtcccgccacggacaggcaaacctgccggacatgaccatgtcc
ttccgctcgacgccggaagtgctcggcttcgtcgatgcggtcttcaatcaggatagtttc
gcaggcgaccccttctccgacatgccgcccgatgaggccgacgcgctcacccatgtcgcc
aaacgcagcgatgaggccgggcgcgtcgatctctggccgatcacgccgcacactgaggaa
gaagaaggcgacccgtgggacgccccgctcgaccatatcagcgagagctctcccaagaac
aaactcgccaaacaggtcgccgcagagatccgccgcatggtcgatgcgggtgagcctgtc
tggcgcaaaggcgagccgcaaggcgcccgccccgaagacttcctcatcctggtgcgcaaa
cgcggcgcgctcttcaacgccctcatccgcgccctcaaggatgagaagctccccgtcgcg
ggtgcagaccggctcgtcctgctcgaccatatcggcgtgcaggactgcctgaacctcatt
cgctttgccctcttcccctccgatgacctgaccctcgccgagatactgcgcggccccttc
tgcggcctcatcgatgacgacaatcacctcttcccgctcgcctataagcgaaagaatgaa
agcctgtgggaccggcttcaggccgcgactgacactgtctttgcgccggcacgcaccttc
tgcgaggacctcctcgcccaccgccacctgcccgctttcgactttctctcccgcgccctg
acgacgcgccgcgaggacggcctctcaggctgggaccgtctcatccagcgcctcggagag
cctgcccgcgacccggtcagcgcccttatcgaccgcgcgctcggctatgacatgggcgag
gccgccagcctccagcttttcctcgccgagatcgaaagcgacaccagccagctcaaacgc
gaccttgccgaggccaatggcgaaatccgcgtgatgaccgtccacggcgccaagggcctg
caggcgcccatcgtcatcctgccggacacaaccggcgcagaaaaagccgatacgaacggg
ctcttcatgctggaaggtggcatcccggtctattccaaacgcgcctccgaagacccgccg
gtcatcgccgcccgccgccttgcccgacagaccgcgcaggcccgcgagtcccgccgcctt
ctctatgtggcactcacccgcgcagaagaccggctcatcattgcgggcgcccatcatggc
tcaaaatctggcgcaggctatggcgacacctcatggtacgccctctgccggcagggcatg
ctgtcgctgacaggcggcgatggcggagatgccgacgagaccctcacctatggcgaggtc
cagcccgccgtcacgccagatagcggcgccagcgcggccccgcctgccgcccccctctgg
acgaaacagcaagcccccggcactggccccaccacccgcatccgcgcgcccagccgcctg
ctgaccgacaccgcccccgtctcgaaacccttcggcccggcccgcgccgccgccctcaaa
cgcggcaagctcatccacaccctgctgcaatacctgccagagctcgcccccgatgcccgc
gaggccgccgcccgcacctggttagaccgccacgcagagctcgatgacaccgcccgcgct
gagatcctcgccgtcaccctccgcacgctcagcgatgacagtttcagccacgttttcgcc
actggcgggcgctccgaagccgccattgtcggcgaaatcgagaccgcctctggtgccacc
atcatcaatggccgggtcgaccgcctcgtcgtcagcgacacagaagtcctcatcatcgac
tacaagacagaccgccccgccccggcgcgggtggaggatgtcgacgcgtcctatatcgcc
cagatggcggcctatacgcacatcctgtctgagacctggccaaggcgcaccgtccgcgcg
ggcctgctctacacagacggccccgtcctcttcgaactccctaccagcttattgcagaac
tcattggagcgtttagctggccgcctttga
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