Thermocaproicibacter melissae: NOG13_00410
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Entry
NOG13_00410 CDS
T09029
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NOG13_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmel03021
]
NOG13_00410
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_00410
Enzymes [BR:
tmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NOG13_00410
Transcription machinery [BR:
tmel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NOG13_00410
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NOG13_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
I_LWEQ
Motif
Other DBs
NCBI-ProteinID:
WBY64215
LinkDB
All DBs
Position
complement(85520..86473)
Genome browser
AA seq
317 aa
AA seq
DB search
MIEFEKPKIETSDLSEDGTYGKFVVEPLERGFGTTLGNSLRRVLLSSLQGVAVTSVKIDG
VLHEFSTIPGVKEDVTEIILNLKGLTAKLHCNGPKTVEIAAEGPCEVTADSIKCDSEVEI
LNPDMHIATLGEGAKLFMEITLDKGRGYVPAERNKQNMGANVIGVLPVDSIYTPVYKVNY
NVEPTRVGQSIDYDKLTLEVWTNGVISAQEAVSLAAKVLTEHLNLFVDLSDKGSSTEIMV
EKDDKSKEKLLNMTIEELDLSVRSFNCLKRAGINTVGDIISRTEEDMMKVRNLGRKSLEE
VVWKMASLGFNLRKEDE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtttgagaagccaaaaatagagacaagtgatttatccgaggacggaacctac
ggcaagttcgttgttgagccgctggaacgtggctttggaacgactttgggaaatagcctc
aggcgtgtgctcctttcttcgctgcagggagtagcggtgacctcggtcaaaatcgacggc
gtacttcatgagttttccaccattcccggtgtcaaagaggatgtaacagagattatcctc
aacctgaaaggtttgaccgcaaaactgcactgcaatggccccaaaacggtggaaatcgcc
gccgaaggcccgtgcgaagtaacggcagactctatcaagtgcgacagtgaagtggaaatc
ctgaatccggatatgcacattgccacattgggcgaaggtgccaagctgttcatggaaatc
acccttgacaagggccgcggctatgttcccgctgagcggaacaagcagaacatgggtgcc
aacgtaatcggtgtgctgccggtggattccatttataccccggtttataaagttaattac
aatgttgagccgacccgcgtcggacagagtatcgactacgataagctgacgctggaagtc
tggacgaacggagtcattagtgcgcaggaagccgtttcacttgctgcaaaggtgcttacc
gagcatctcaatctgttcgttgatttgtccgataagggcagcagcacagaaatcatggta
gaaaaagacgacaagagcaaagagaagctcctcaacatgacgattgaggaactcgacctt
tcggttcgttctttcaactgcctgaaacgtgcaggaatcaatactgtcggcgatatcatc
agcaggacagaagaagacatgatgaaagttcgcaaccttgggcgcaagtccctggaagaa
gtcgtctggaagatggcttcgttgggcttcaatctccgcaaggaagacgaatga
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