KEGG   Talaromyces marneffei: EYB26_008754
Entry
EYB26_008754      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
tmf  Talaromyces marneffei
Pathway
tmf03018  RNA degradation
tmf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EYB26_008754
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EYB26_008754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmf03019]
    EYB26_008754
   03041 Spliceosome [BR:tmf03041]
    EYB26_008754
Messenger RNA biogenesis [BR:tmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EYB26_008754
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EYB26_008754
Spliceosome [BR:tmf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EYB26_008754
 Complex C
  U2 snRNP components
    EYB26_008754
SSDB
Motif
Pfam: LSM LRR_9 Hfq SM-ATX
Other DBs
NCBI-GeneID: 79168727
NCBI-ProteinID: XP_054123980
LinkDB
Position
7:join(298649..298662,298744..298994,299059..299090)
AA seq 98 aa
MLFFSFFKTLTNHIVTVELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVVLPSAEVDRGLLEDATRREAANQAGKAR
NT seq 297 nt   +upstreamnt  +downstreamnt
atgttgttctttagcttcttcaaaaccctaacaaaccacatcgtaaccgtcgaactcaag
aacgacatccgaatccgcggcactttaaaatcggtcgatcaatacctcaacatcaaacta
gatgatgtcgatgtcctagatctagacaaatatccgcatttgtcgtctgtgaagaatatg
tttattagaggcagtgtggtgcggtatgtggttttgccgtccgcggaggttgatagaggg
ttgttggaggatgccacgagacgagaagctgcgaatcaggccggtaaagctcgatga

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