Talaromyces marneffei: EYB26_009752
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Entry
EYB26_009752 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
tmf
Talaromyces marneffei
Pathway
tmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYB26_009752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_009752
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
EYB26_009752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_1
TPR_14
TPR_16
TPR_12
TPR_7
TPR_11
ARM_TT21_N
HrpB1_HrpK
TPR_20
RNPP_C
TPPII_C
TPR_15
TerB
Motif
Other DBs
NCBI-GeneID:
79169725
NCBI-ProteinID:
XP_054124974
LinkDB
All DBs
Position
8:complement(join(1128489..1130548,1130609..1132434,1132491..1132691,1132759..1132874))
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AA seq
1400 aa
AA seq
DB search
MSGKAALKAVKSALDSKDFELAASKAKDLIDRDSTNYHAHVFLGLAQDKLGKPDEAESSY
LAASRIKDKDKTAWQGLITLYEKQGSNKLDAYHDVALRLGQILAENDERDRCVDVVDKFV
KFTRRNGNRTQQKLALHIQLPTCPLYSSLEGRVPHPADTYSRLIELTEAEEKEFINREIG
ERRTRLGARIDQVTAEVKREALSNPELEEYYRGLIDWTNDDGIRHQTEERLLQRAYDLLS
VLPQDQKSGKRDELVRLARDMVIIKHPFLLAWKIELEWKDVEDFSEWDPVLLRDFTEFFP
EDGLSKVIQGFLKGDLSPFPTETELRESAQVEPGEDRGEVAEVAELAVEDRLILMSNGLE
QSSDSIIAHRVMAELYLNLEEYASAVEVARKGITIIKDISRKTGLALPETIDYVNTTLAT
ALISYQSPRNHPEAKGIFESILKRKPKNTKCLLGIGLILEEDHDYEEAYHFLQQARERDP
SNVKIRSELAWCTALNGDLESGLEMLQDVLAEIEDDENQSREFKAEILYRIGHCQWELDP
SSAARKNRNGAYASFLASIQADLNYAPAYTRLGIYYADYKKDKARAKRCFHKAFELSSSE
IEAAERLAKAFANKQEWDLVEAVAQRVVDSGKAKPAPGSKRKGHSWPYAALGVVQLNKQQ
YTKSIVSYQAALRISPGDYHSWVGLGESYHNSGRYIAATKAFEHAEALESTLSKREYDDA
IGRYEDVLAIRPNEFGVMIALLQTLTESSWKNLDTGLFNDAAKSAHRALEIAIAMAKETP
NVFNLWKAAGDACAVFSYIKAKSGHVAPSELQALLSINVPDGAYDILADTDYVGSNHVIF
NASEEGLSSSSDLCIYASILAYKRAVYVSANDRHAQAVSWYNLGWAEYRAYRCIEGEPNT
KKEKRYTKKFLKGAIRCFKQAIELEAGNSEFWNSLGVVTASLSPKVAQHAFVRSLHLNDR
SAQNWTNLGAFYLINNDIQLANEAFTRGQSADPDYAPAWLGQGIVALLFGDPSEARALFR
HGFEISTSSLTLTKKQYTLSLFDRLLEDATISNELSQLIQPYFALQQLHFQEPSALSFEH
LSALFAERIGEYAQAESALGVVCTGVEAEYEVSESSSSLLRFALANADIARVHLANHEYD
QAVEKAELALTLSGDDGLTTPDPGMVTSLRLSAHLTAGLAYYYLKSMDQAIDMFRDALHE
AENDPEVVCLLAQVLWAKGGEEERNVAREQLFESVEKNPEHLGAVTLLGAIALLDGDEDA
IEAVHADLETMRTRDDIEIHDRARVVKLLSAISAMGFSADSDIPEAERLVVEASRAVMLA
PGLPQGWMELTAATGELHPATIAVKTALRNVPPRGGLDAVDLCTAYVQTGTIGDSLRAIM
VAPWKTDGWESLNESLLDAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaaggctgctctgaaggctgtcaagtcagcgttggacagcaaagattttgag
cttgcagcttccaaggcgaaggatttgatcgatcgggattccacaaactaccatgcacat
gttttcctaggactcgcacaagacaagctcggaaaacccgacgaagcggaatcatcatac
ctcgccgcttctcgtatcaaagacaaggataagaccgcatggcagggactaataaccttg
tacgaaaaacaaggctctaataagcttgacgcttatcatgatgttgccttgaggttgggg
caaattctcgcagaaaatgatgaacgcgatcggtgtgtcgacgtcgtggacaagttcgta
aaattcactcgaagaaacggaaatcgcactcaacaaaagctcgctctacatatacaatta
ccaacatgccccctatactcatcgctcgaaggaagggtcccacatcctgcagacacctac
tcaagactgatagagcttaccgaggccgaggaaaaggaattcatcaatcgtgaaatcggc
gaaagacgcacccgtctcggcgcaagaatcgaccaggtcactgcggaagtcaagcgcgaa
gctctcagcaatccagaacttgaagaatactacagaggtcttattgactggactaacgac
gatggtattagacatcaaactgaagagcgacttttacaacgagcatatgatttgctttcg
gtccttccgcaagatcagaaatccggaaaacgggatgagttagttcgtctggcgcgggat
atggtcattatcaagcatccgtttcttctcgcttggaagattgagcttgaatggaaggat
gttgaagatttctccgagtgggatcccgtccttcttcgcgacttcacggaatttttccct
gaagatggtttaagcaaggtcatccaaggcttcttgaagggcgatctatcgccgttcccc
acggaaacagagttacgggaatctgctcaagttgaaccaggcgaggatagaggagaagtt
gcagaggttgcagaactagcggtcgaagacagactgatattgatgtcgaatggtctcgaa
caatcttcggactcgataatagcccatcgagttatggctgagctttatttgaacttggaa
gaatatgcaagtgcagtcgaggttgcgcgcaagggcataacaatcatcaaagatatctcc
agaaaaacgggtctagcccttccagaaactatcgactacgtcaatactactttagctact
gcattgatatcgtatcagtcgccccgcaatcaccccgaggcaaagggcatcttcgaaagc
atcttgaaacgaaaacccaagaatacgaaatgtctactggggatcggtctaattctagag
gaagatcatgattatgaagaagcctaccacttcttgcagcaagcccgagaacgcgatcca
tctaatgtcaagattcgatcagagttagcttggtgcacggcactcaatggagatcttgaa
agtggattggagatgttgcaagacgtacttgctgaaattgaagacgacgaaaaccagagt
cgagagttcaaagccgagatactttatcgtattgggcattgtcaatgggaactagatcca
tctagtgctgctcgaaagaaccgcaatggagcgtatgccagcttcttagcctcgattcaa
gccgacctgaattatgcaccagcctatactagactgggaatatactacgccgactataag
aaagacaaagcccgagcaaaacgatgcttccacaaggcattcgagctgtcatcatctgag
atcgaagccgccgaacgactagcgaaggcgtttgccaataaacaagaatgggatcttgtc
gaagcagtcgctcagcgtgtagtcgattctgggaaggcaaaacctgctccaggatctaag
cgcaagggtcacagctggccttatgcagctctaggtgttgtgcaactgaataaacagcag
tatactaaaagcattgtgtcctaccaggcggctttgcggatatctccaggcgactatcat
tcctgggttggacttggagaaagctatcataattctgggaggtacattgcggctacgaaa
gcgttcgaacatgccgaggcgttagagtctacgctttcgaaaagagagtacgatgatgcg
attggcagatatgaggatgtactcgccattcgccccaatgagtttggagtgatgattgcc
cttctccaaacattgacagaaagttcatggaaaaatcttgataccggcctgttcaacgat
gcagccaagtccgcacatagggctttggaaattgctatcgcaatggcgaaggagacacca
aacgtattcaacctatggaaagcagccggtgatgcttgcgccgttttctcctacatcaag
gccaaatcaggacatgttgccccctcagaattacaggctcttttaagtatcaacgttcca
gatggtgcgtacgatatattggccgatacagattatgtgggaagcaaccatgtgatcttc
aatgcctctgaggaaggtttgtcttcttcatcagatctctgcatctatgcatccatccta
gcatacaagcgagcggtgtatgtatccgcaaatgacagacatgctcaagccgtctcttgg
tacaacctcggatgggctgaatacagagcgtacagatgtattgaaggtgaacctaacacg
aagaaggagaagcgatatacaaagaaatttctcaaaggagctattcgatgtttcaaacag
gctattgaacttgaggcaggcaactcagaattctggaattccctcggagttgtgacagct
tcactcagtccaaaagttgctcagcatgcattcgttcgcagtctacatctcaatgatcgt
agcgctcagaattggacaaatcttggtgctttttatctgattaataatgatatccagctt
gcaaatgaagcgttcactcgagggcaatctgctgatcctgactatgccccagcctggcta
ggtcaaggtattgtagcacttcttttcggggatccatcagaagctagagctttgttcaga
catggatttgaaatctccacatcatctttgacattgacaaagaaacagtatactctcagt
ctgtttgatcgccttctcgaagacgccacgatttccaacgaattgtcacaactgatccag
ccttacttcgcacttcaacaattacactttcaggagccgtctgctttatcgttcgagcac
ctttctgccttgttcgccgagcggattggcgagtatgcgcaagctgagtctgctctcggt
gttgtctgcactggggtggaagcagaatatgaagtgtctgagtcgtcgtcatcacttcta
cgctttgcactcgcaaatgcggatatcgcccgtgtacaccttgccaatcatgaatatgac
caggctgtcgagaaggccgaactagcattaaccttgtctggagatgatggtctaactacc
cctgatccaggcatggtgacaagccttcgtctgtcggcacatcttactgctggcttggct
tactattatctgaaatcaatggaccaggctattgatatgttccgtgatgcgctccatgaa
gcagaaaacgaccccgaagtggtatgccttctcgcacaagtgctatgggcaaagggcggg
gaagaggaacggaatgtagcccgtgagcaattgtttgaatctgtcgaaaagaatccggaa
catctcggcgctgttactctcttgggagctattgcacttctggatggtgatgaagatgcc
atcgaagcggtacacgcagatcttgaaacaatgagaacgagagacgacatcgaaatccac
gaccgggcacgagttgtgaaattgctatcagcaatctctgctatgggtttcagcgctgat
agtgacattccagaggcagaacggctggtcgtggaggcctccagggccgtcatgctcgct
cctggattgcctcaaggctggatggagcttactgccgctacaggagaactacacccagcg
acaatagccgtgaagactgctcttcgaaacgttcctccccgaggtggtctggatgcggtt
gatttgtgtacagcgtacgtccaaacaggcaccattggagactcgttgcgagccatcatg
gtggctccatggaaaacagatggatgggagagcctgaatgaaagtttattagatgctgaa
tga
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integrated database retrieval system
