Thiomicrospira microaerophila: JX580_06635
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Entry
JX580_06635 CDS
T08259
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JX580_06635 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmh03032
]
JX580_06635 (rnhB)
Enzymes [BR:
tmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
JX580_06635 (rnhB)
DNA replication proteins [BR:
tmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
JX580_06635 (rnhB)
Elongation factors (archaeal)
JX580_06635 (rnhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
PH_NISCH_C
Motif
Other DBs
NCBI-ProteinID:
UQB41370
LinkDB
All DBs
Position
complement(1356645..1357259)
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AA seq
204 aa
AA seq
DB search
MQQVDLFNPSDPTQSRIELDRIVGVDEVGRGPLIGEVVAAAVILPKNCQLELKDSKKLSH
LKRVELAERIKEQALEYAIMGVSPEQIDQLNILQATLLAMKKAVEKLTQPFEEVWVDGNR
CPDFNCPCQAIVKGDGLVLSISAASILAKVYRDQQMELLHQQYPLYGFDQHKGYPTKAHL
AAIEKYGLIEGYRKSFRPISQFYG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggttgatttatttaaccctagcgatccaacacaatcgcggattgagttggat
cggattgtgggagtcgatgaagtagggcgtggtccgttgatcggtgaggtggtcgctgca
gccgttatcttgccaaaaaattgtcagttggaactgaaagattcaaaaaagttaagtcat
ttaaagcgcgtcgaacttgctgagagaattaaggaacaggctttggagtacgctatcatg
ggcgtttctcctgaacagattgatcaacttaatatccttcaagccactttattagcaatg
aaaaaggccgtcgaaaaattgacgcagccttttgaagaggtttgggtagatggtaatcgt
tgccctgattttaattgtccttgccaagcgattgtcaagggagatggcttggttctttca
attagtgccgcttcaatattagcgaaagtttatcgtgaccagcaaatggaactattgcat
caacaatacccgctgtatggatttgatcagcataaaggttacccaacaaaagctcatctt
gctgcgattgaaaaatacgggttaattgaaggttaccggaaaagttttagacctataagt
caattctatggttaa
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