Tuber melanosporum: GSTUM_00004441001
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Entry
GSTUM_00004441001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
tml
Tuber melanosporum
Pathway
tml03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTUM_00004441001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00004441001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSTUM_00004441001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
GSTUM_00004441001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
9181167
NCBI-ProteinID:
XP_002835925
INRA:
GSTUM_00004441001
UniProt:
D5G6D9
LinkDB
All DBs
AA seq
1451 aa
AA seq
DB search
MERSRRAGAKKTPHEGFKELRELKASGKTRLSGYKVEEEEDFYDLVDEEEYKKVVRQRLD
QDDFVVDDQGEGYADNGMDDWDDDHRREGSWEESEDERSKKGGRSAKARKAEEQKRKGEQ
EGNIRKFFNSNTAPTAKPKPKVKEENLNFLNDLLGEFDNDSPAEPISLMSKRPRGDPVAK
VRRLSPPLKDSKPTRMDQISQAGGEGEKPSFAGSSLSNAGNADNDDQDYGSFDEDVDMGD
APVVPSSPIADAVKRKRSKDEDEDDEDLSVARIQGSKSIKVEAVNIIASRPALKSQTVKQ
EAVVPNKPVAAIDPTTWASFAGGDNVTSSPALDGSDLEKLGPEDVEEDGFIKMFWLDYTE
VHGSLCLFGKVQDKKSGKYVSAFLKIDGILRNLYFLPRETRYKNKLDTGEIVAMQDVHDE
IAEIMEHHGINFFKAKPSWRRYAFELPGIPKGSDYLKVLYPYTKPPFSHELTGQTFSCVF
GTSTALFEQFVLCRNIMGPCWLKIEGANFTAVENSSWCKLEIQVAEPQQVTTIGDADSLE
PPPLTLMSIALRTHMNVKDNKQEILAVSCRIYENISLNDANAPEKLSCQMFSVVRPIDPV
YPADFEKLVQNHKGTISPQRTESMLLTTFLSKLHQIDPDVLIGHQLEGVDYGILLHRMKE
RMTTNWHRLGRMKRSAWPQYGGRMAGSFFAERHLVSGRLICDLANDLGKSLTTQCQSWSL
TEMCDLILGDKRQDLDNAEALRTWATTGRGLLDYVKHCEADTYFIAAIALKIQIVPLAKQ
LTNLAGNSWARTMSGTRAERNEYILLHEFYRNKYICPDKVYGKGNTTQKADGAGNEGENE
GGGVKKKEKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNICFTTVKRDDSGEEKV
PDVPETQVLGILPRLISTLVQRRRIVKNLMKDKTATDVQKSQWDIKQQALKLTANSMYGC
LGYPRSRFYARPLAMLTTHKGREILRSTKELAEAIDLQVIYGDTDSVMINTGVDNYADAI
KIGTDFKRKVNEQYKLLEIDIDNVFQRLLLHAKKKYAAINYVEINGKLATKLELSKDASS
HILAEIFSGDDTEVVVERIHEYLRGLAEKVRENAFPLMKYIIYTKLGKSLDEYGTSLQTM
PQVQVALRKNARGEPVKSGDVVSYVITGGEGSEAPDKNVSDRAYAPQDIMKTDSGLKPVD
AEWYLIKQIFPPIERLCGPIEGTDAMRLAECLGLDTRKYQITNAPDQEDRTIHPLESTLP
DEERFKDAVRLQLQCRACGESFQFEGLILSYECCSHEGIVCRNASCNKVLSVPSIVAQVE
CQIRQLTSKYYEAWLVCDDAACGNRTRQMNVYGKRCLGPNRLADECRGVMGYEYTDKMLY
TQLLYFSSLFNVGKATAKPKDGSEKQETITALARTNQPRFEVISNVVQKYLDKCGRQWVS
MDSIFAFSVGV
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatcacgtcgggctggtgcaaagaaaacccctcacgagggattcaaagagctt
cgtgagcttaaagcttccgggaagacgcgtttgtctgggtacaaggtcgaggaagaggag
gacttttatgatctagtggacgaggaggaatacaagaaggttgtgcgtcagcgtcttgac
caagatgattttgtggtagatgaccagggggaaggctacgcagacaatgggatggatgac
tgggatgacgatcatcgccgggagggaagttgggaggagagtgaagatgagaggtcaaag
aaggggggaaggtcggcgaaagccagaaaggcggaggagcagaaacggaagggagagcaa
gaggggaatatccgaaaattcttcaattcgaataccgcacccaccgccaaaccgaagccc
aaggtgaaagaagaaaatctcaactttttgaacgaccttctaggggaattcgataacgac
tctccggcggagccgatatcgttgatgagtaaaaggcctagaggcgaccctgtggcaaaa
gtacgccggctttcacctcccctgaaggactcaaaacccaccaggatggaccaaattagt
caagccggaggggagggcgagaaaccgagttttgcaggctcttcactttccaatgccgga
aatgctgataatgatgaccaagactatggttcttttgatgaagatgtagatatgggcgac
gccccggtagtaccatcttctccaatcgcggatgccgtcaagaggaagcgctcgaaagat
gaggacgaagatgatgaagatctttctgttgcgcggattcaaggtagcaaatctatcaag
gtggaagctgtcaacatcattgcttcgaggccggcactcaagagtcaaactgtgaaacaa
gaggcagttgtacccaacaaaccagtcgcagcgattgatcctacaacctgggcatcgttt
gccggaggggacaatgtcacgagctctcctgctttagatggttctgaccttgaaaagctg
gggcccgaggacgttgaggaagatgggttcattaaaatgttctggttagactatactgag
gttcatgggagcctttgtctttttgggaaagttcaagacaaaaagtcggggaagtatgtc
agtgcattcctaaaaattgatggaatactcagaaatctatactttttgccaagggaaaca
agatacaagaataaattggacactggtgagatcgtagcaatgcaagatgtccatgatgag
atcgcagaaatcatggaacaccatggaatcaatttttttaaggctaagccatcatggaga
aggtatgcgtttgaacttcccggtattcctaaaggaagcgattacttgaaggttctatat
ccatataccaagccacccttttcccatgagcttacagggcagacattctcttgcgttttt
ggaacaagcacagctctcttcgagcaattcgtgttatgtagaaacattatgggcccttgt
tggttgaaaatcgagggggccaatttcactgcagtggagaattcatcgtggtgtaaatta
gagatccaagtcgccgaaccgcaacaggttactactatcggtgatgcggattcattggaa
cctcctcctttgacattgatgagtattgcattacgcacacacatgaatgtcaaggataac
aagcaagaaattcttgctgtgagttgcaggatatacgagaatatctcactaaatgatgca
aatgcgccggagaagctctcatgtcaaatgttttccgtggttagaccgattgatccagtg
tacccagctgactttgaaaagcttgttcaaaatcacaaaggcactatcagcccccagaga
actgagagcatgcttttgaccacattcctctccaagcttcaccaaatagatcccgatgtt
ctgatcggacatcagttagagggtgttgactatgggatcttgctgcatagaatgaaagaa
cgcatgactactaattggcaccgactcggacggatgaagcgaagtgcatggccccagtac
ggcggccgaatggcaggaagcttctttgctgagagacaccttgtctctggcagacttatt
tgtgatcttgccaacgatcttggaaagtcccttacgacgcaatgccaatcctggagtctc
acggaaatgtgtgacttgatattgggggataaacggcaggacctcgataatgctgaagct
ttgaggacgtgggcaaccactggtagaggtttgctcgattacgtaaagcattgcgaggcc
gatacatatttcatcgcggccattgcactcaagatccagatagtacctcttgccaaacag
ctcaccaatcttgctggtaattcatgggccagaactatgagcggtacgagagctgaacgc
aatgagtacattttgcttcatgaattttaccgcaataagtatatttgtcctgacaaggtg
tacggcaagggtaataccactcagaaagcggacggagctgggaatgagggggaaaatgaa
ggtggcggggtcaagaagaaagagaagtataagggtggcttagtctttgaaccggagaaa
ggcctctacgacaaattcattcttgtcatggacttcaactccctataccccagtatcatc
caggagtttaacatctgttttacgacagtcaagcgggatgattcgggtgaagagaaagtc
cctgatgtgcctgaaacacaggtgttagggatattgcctagacttatctcaacacttgtc
caacgtagaaggatcgtcaagaatctcatgaaagacaagacagccaccgatgttcaaaaa
tcacagtgggacatcaaacaacaagctctgaagcttacagcgaactctatgtacggatgt
cttggatacccccgttccaggttctacgctcgtcccctagcaatgcttacaacccataaa
ggacgtgagatcttgaggagcactaaagaacttgcggaggctatcgatctgcaggtcata
tatggtgacaccgactcggtcatgattaatactggcgtggacaactatgccgacgcaatc
aaaattgggactgatttcaagagaaaagttaatgagcaatacaaactccttgagattgac
atcgacaatgtgttccagcggctactgttgcatgcaaagaagaaatacgcggcaataaat
tatgtcgagattaacggaaaattagctacgaagttggagctatcgaaagacgcctcgtcg
cacatattggccgaaattttctcgggggatgacaccgaggttgttgtagagaggatccat
gaatacctccgtggcctagctgagaaggttcgagagaatgcgtttcccttgatgaaatat
attatatataccaaactcggaaaaagcctcgacgagtatggtactagcttgcaaactatg
ccccaggtccaagtggctttgcggaagaatgcccgcggggagcccgtaaaaagtggcgac
gttgtttcatatgtcattacgggtggtgaagggagtgaagcaccagacaagaatgtttcc
gaccgagcttacgcaccccaagacatcatgaagactgattccggcttgaagcctgtagat
gcggaatggtatcttatcaaacagatatttccacctattgaacgtctttgtgggcccatc
gaaggaacggatgccatgaggctggcagagtgccttgggcttgatacacgcaaataccag
attaccaatgccccggatcaagaagaccgcaccatacatcccttggaatccacccttccg
gatgaggagaggttcaaggatgctgttagactccaacttcaatgccgggcttgtggagaa
tcattccaatttgaaggactaattttgtcctatgagtgctgctctcatgaaggaatcgtt
tgcagaaacgcgtcttgcaataaagtattaagcgtcccgtcgattgtggcacaggttgag
tgccaaattcgccaactgacatcaaaatattatgaagcctggctggtttgcgatgatgcc
gcctgtggaaacagaacacggcaaatgaacgtctatgggaaacgttgtcttgggccaaac
agacttgcagatgagtgtaggggtgtcatgggatatgagtacacagataaaatgttgtac
acccaactcttatatttctccagccttttcaacgttgggaaggcaacagcaaaaccgaaa
gatggttcagagaagcaagagaccatcacggcattagctcgaacgaaccaaccgaggttt
gaagtgatctcgaatgtcgtccagaaataccttgataagtgcgggagacaatgggtttca
atggatagtatattcgctttcagtgttggggtctag
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integrated database retrieval system