KEGG   Tuber melanosporum: GSTUM_00004676001
Entry
GSTUM_00004676001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
tml  Tuber melanosporum
Pathway
tml03020  RNA polymerase
tml03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GSTUM_00004676001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTUM_00004676001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00004676001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00004676001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     GSTUM_00004676001
  RNA polymerase III system
   RNA polymerase III
     GSTUM_00004676001
  RNA polymerase I system
   RNA polymerase I
     GSTUM_00004676001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GSTUM_00004676001
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 9187024
NCBI-ProteinID: XP_002836354
INRA: GSTUM_00004676001
UniProt: D5G7Q2
LinkDB
AA seq 174 aa
MCLLPFFSTTNLSPHQNLSRTPLISGSTNTMSESILFDSTFPITGFDQNKYDRVARISGE
REDLKFSLDIHVELYPVAIGETVQLSLASTLSPDGAKEDPAESKTGWKENKAAEPSLADT
YDYVCHGKVYRFEEGNGEFIKVYASFGGLLLFLEGPHKKLSSMRHEYVYLLMKK
NT seq 525 nt   +upstreamnt  +downstreamnt
atgtgcttgctccctttcttctccacaaccaacctgtcaccccatcagaacctctccaga
actccgctgatctccggctctaccaacacaatgagcgagtcgattctctttgattccaca
ttccctattactgggttcgaccagaataaatacgaccgtgtcgctcgcatatctggggag
agagaggatctaaaattctctcttgatatccacgtcgagctctacccggttgccattggc
gagacggttcaactatccctcgcatccaccttatctcccgatggcgcaaaagaggaccca
gcagagagcaaaaccggctggaaggagaacaaagcagcggagccgagccttgctgacacc
tatgactacgtttgtcatgggaaggtgtatagattcgaagagggaaatggggagttcatc
aaggtatacgcctcctttggggggttgcttctttttcttgaaggccctcacaagaagctg
tcctcaatgagacacgagtatgtctacttactcatgaaaaagtaa

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