Tuber melanosporum: GSTUM_00006820001
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Entry
GSTUM_00006820001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tml
Tuber melanosporum
Pathway
tml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GSTUM_00006820001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tml01007
]
GSTUM_00006820001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tml03016
]
GSTUM_00006820001
Enzymes [BR:
tml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
GSTUM_00006820001
Amino acid related enzymes [BR:
tml01007
]
Aminoacyl-tRNA synthetase
Class I (G)
GSTUM_00006820001
Transfer RNA biogenesis [BR:
tml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GSTUM_00006820001
Prokaryotic type
GSTUM_00006820001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
Motif
Other DBs
NCBI-GeneID:
9188072
NCBI-ProteinID:
XP_002839025
INRA:
GSTUM_00006820001
UniProt:
D5GFC3
LinkDB
All DBs
AA seq
718 aa
AA seq
DB search
MASASRREQPAWTPPPSHGAPLPPLHIYNSLTREKNVFVPIDPSGRRITWYCCGPTVYDA
GHLGHARNYVTTDVLRRILRDYFGFDVQFVQNVTDVDDKIILRARQQHLLEEFISRNSSI
TPEVASTVSTAWTAYLKKNTAAGDDVTPENFETWAVGAQKEIMMILDEKTTNATSSILLP
YLDSLNQGREYPPEVFSKLTSYWENHFNEDMATLNVLPPTTVTRVSEFIPENVAFVKKLV
DRGFAYPTADGSSLIADGEASKKTPQDFALWKAFKAEKPGEPSWDSPWGKGRPGWHIECS
VMCSEVLGGQVDIHSGGIDLAFPHHDNEIAQSEAYWDGCCDTPKTADGKHQWVNYFLHMG
HLSIHGSKMSKSLKNFVSIRDALTRGGWTPRGLRVVFLLGGWRDGIEVREGVLMEAKSWE
TTVAKFFSNVKALIAEEEEEEKKGNRAKQLFGPLEHAIYKDLDTARQNLHTALCDSFNTP
TAMKALTDLIGSTNKYMSRTKSLAAVKEIARWVTRIVTIFGLDSTSTPNGSDRIGWADSA
TSSTGAEDILLPYLRTLSTFRDNVRTLAISSPKDTISKDILLLSDRLRDHDLASLGVALD
DRESAKGAPALIKFVPAEELIAAREEKERRAAEKERKKEEARLKKEEEDRKKEELAKVNH
LEMFKTDGEFSEWDDQGIPTKDKEGVEVTKSRRKVLVKLWEKQRKLHEGWSKAKSGTA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcatctagaagagagcagccggcgtggactcccccaccatctcacggggct
cccctccccccacttcatatttacaactcgctaacaagggagaagaacgtgtttgttcct
atcgaccccagcggcaggaggattacttggtactgctgtgggcctacggtttatgatgcg
gggcatttgggtcatgcgcggaattatgtcactacggatgtcttgcggaggatattgagg
gattatttcgggttcgatgtgcaatttgtccagaatgtcacggatgttgacgataagatt
atcctgagagctcgtcagcagcatctgcttgaggaatttatttctcggaattcgtctatt
actccggaagttgcgtctaccgtgtctacagcttggactgcttacctaaagaagaatacg
gcagccggtgacgatgtgactcccgagaattttgaaacttgggccgtgggtgctcaaaaa
gagattatgatgatcctggacgaaaagactacaaatgctacatcttcaatcctacttccc
tacctggactcactaaaccaaggtcgggaatacccccctgaggtatttagcaagcttacc
agttactgggagaatcattttaacgaagacatggcaacactcaatgtcctccctcccaca
acggttactcgtgtgagcgagttcattcccgagaacgtggcatttgtaaagaagctcgtc
gatagaggatttgcgtatcctacagcagacgggtcatccttgatcgcagatggtgaggcc
agcaagaagacaccacaagattttgctctgtggaaggcatttaaggcagagaagccagga
gaaccaagctgggacagtccgtggggcaagggacgacctggatggcatatcgagtgctcg
gtaatgtgctcggaagtcttgggtggtcaagtcgatattcattctgggggaattgacctt
gcgttcccgcaccatgacaatgagattgcccagagtgaggcgtactgggatggatgctgc
gacacccccaaaaccgctgacggaaagcaccaatgggtaaactatttcctccacatgggc
cacctatcaatccacggtagtaaaatgtccaagagtttaaagaactttgtttccatccgc
gatgcactcacccgcggggggtggaccccgcgagggcttcgagtcgtcttcctattaggc
gggtggagagacggcattgaagttcgggagggggtcctaatggaagctaagagctgggag
accacggtagcaaagttcttctccaacgtgaaggcactgatagcggaggaagaagaagag
gagaagaaggggaaccgagccaagcagctatttggacctttggagcatgctatatataaa
gaccttgacaccgcccgccaaaacctccacaccgccttgtgcgatagttttaacaccccc
accgcaatgaaagccctgaccgacctaatcggctcgacgaacaaatacatgtcccggacc
aaatccctggcagctgtcaaggaaattgccaggtgggtcacacgaatcgtgacaatattc
ggcctagattcaaccagcaccccaaacggctctgatcgtattggctgggccgactctgcc
acctcctccacaggtgcggaagacatcttactaccatacctccgcaccctctccacgttt
cgcgacaacgtccgcaccctcgccatctcgagccccaaagataccatctcgaaggatatt
ctactgctctccgaccgcctccgcgatcacgatttggcaagtttgggcgttgcgctcgac
gacagagagtcagccaaaggcgcgccggcacttattaaattcgtcccggcggaggaactc
atagcggcgcgggaagaaaaggaacgccgcgctgcggagaaagagaggaagaaggaagag
gcaaggcttaagaaggaagaggaagatagaaagaaagaggaattggcgaaagtcaaccac
ttggaaatgttcaagacggacggtgaattctcggagtgggatgaccaagggatacctaca
aaggataaggagggggtggaagttacaaagagtaggaggaaagtactggttaagctctgg
gagaagcagaggaagttgcatgaggggtggtcgaaggcaaagagcggcacggcttga
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