KEGG   Tuber melanosporum: GSTUM_00008643001
Entry
GSTUM_00008643001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
tml  Tuber melanosporum
Pathway
tml03022  Basal transcription factors
tml03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTUM_00008643001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTUM_00008643001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00008643001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00008643001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GSTUM_00008643001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GSTUM_00008643001
SSDB
Motif
Pfam: Tfb5 Peptidase_C39
Other DBs
NCBI-GeneID: 9185633
NCBI-ProteinID: XP_002840224
INRA: GSTUM_00008643001
UniProt: D5GIS2
LinkDB
AA seq 83 aa
MPRAVKEIHQSTGVLIECDPSIKAIILKIDKDSGHGYIVEDLDDETLVVKEPKLAELKLR
LEKILERTQMLEKDEESDPENPG
NT seq 252 nt   +upstreamnt  +downstreamnt
atgcccagagcggtgaaagaaatccaccaatccacaggcgtcctaatcgaatgcgacccc
tccatcaaagccataattctcaagatcgataaggattctggtcacgggtatattgtcgag
gacctcgacgatgagacgctggtggtgaaggagccgaagctggcggagctgaagttgcgg
ctggagaagattctggagagaacgcagatgctggagaaggatgaggagagcgaccctgag
aatccgggctag

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