Tistrella mobilis: TMO_b0494
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Entry
TMO_b0494 CDS
T02128
Symbol
ykfD
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
tmo
Tistrella mobilis
Pathway
tmo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TMO_b0494 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmo02000
]
TMO_b0494 (ykfD)
Transporters [BR:
tmo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TMO_b0494 (ykfD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_29
AAA_22
AAA_16
DUF87
RsgA_GTPase
PRK
Motif
Other DBs
NCBI-ProteinID:
AFK56502
UniProt:
I3TUR4
LinkDB
All DBs
Position
pTM2:complement(563212..564228)
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AA seq
338 aa
AA seq
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MITVKPAPRQAAATTEDQPMLSVEDLRVTFTTADGESLKAVDGISFEVRPGETFGVIGES
GSGKSTLGRAIVRLLDPTGGRILYEGDDIARLKGRRLRHKRRELQIIFQDPNAALNPRMS
ILDSVREPLDVVGEGDRASRTGRALDLLDRVGISAEQARRYPHELSGGQKQRVNIARSLT
LNPKLVVCDEVVAALDVSIRGDVLNLFAEIQRERGLAYVFITHDIGVVSHISDRVAVMYL
GRFMELGPVAAVAERPMHPYTRALMSAEPVPLPSHLRQKRRILLEGEIPSPLNPPSGCRF
RTRCPHAQATCAERVPDWRPVAPDHFVACHFAEELAPG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgtgaagcccgcccctcgacaggcagccgccacgaccgaagaccagccgatg
ctgtcggtcgaggatctgcgcgtcaccttcaccaccgccgacggcgaaagcctgaaggcg
gtggacggcatcagtttcgaggtccgcccgggcgaaaccttcggcgtgatcggcgaaagc
ggatcgggcaagtcgacgctcggccgcgccatcgtccgcctgctcgacccgaccggcggc
cggatcctgtacgagggcgacgacatcgcccggttgaagggccgccgcctgcggcacaag
cgccgcgagctgcagatcatcttccaggacccgaacgcggccctgaacccgcggatgagt
attctcgacagcgtccgcgagccgctggacgtggtgggggagggggaccgcgcgtcgcgg
accggccgcgcactcgacctgctcgaccgggtggggatcagcgcggaacaggcgcggcgc
tatccgcacgagctgtcgggcggccagaaacagcgggtcaacatcgcccgctcgctgacg
ctcaacccgaaactggtggtctgcgacgaggtggtggcggcgctggatgtgtcgatccgc
ggcgacgtgctcaacctcttcgccgagatccagcgcgaacgcggcctcgcctatgtcttc
atcacccatgatatcggcgtggtctcgcatatcagcgaccgggtggcggtgatgtatctg
ggccggttcatggagctggggccggtggcggccgtggccgaacggccgatgcacccctat
acccgggcgctgatgtcggccgagccggtgccgctgccgtcccatctgcgccagaagcgc
cggatcctgctggagggtgagatcccgtcgccgctgaacccgccttcgggctgccgcttc
cgcacccgctgcccccatgcgcaggcgacttgcgccgagcgggtgcccgactggcgcccc
gtcgcccccgaccatttcgtcgcctgccacttcgccgaggagctggcgcccggctga
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