KEGG   Tistrella mobilis: TMO_c0741
Entry
TMO_c0741         CDS       T02128                                 
Symbol
nrdJ
Name
(GenBank) Ribonucleotide reductase large subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
tmo  Tistrella mobilis
Pathway
tmo00230  Purine metabolism
tmo00240  Pyrimidine metabolism
tmo01100  Metabolic pathways
tmo01232  Nucleotide metabolism
Module
tmo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tmo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    TMO_c0741 (nrdJ)
   00240 Pyrimidine metabolism
    TMO_c0741 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmo03400]
    TMO_c0741 (nrdJ)
Enzymes [BR:tmo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     TMO_c0741 (nrdJ)
DNA repair and recombination proteins [BR:tmo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    TMO_c0741 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AFK57351
UniProt: I3TX63
LinkDB
Position
pTM3:882342..886010
AA seq 1222 aa
MRIARKLTVDGRSPYQGIEMRTATSEIRNPDGSVVFKLENIEVPASWSQVACDIIAQKYF
RKRGVPAVTRRVPEEGVPEFLWRSEPDEAALAALPEGERYTGERTAAQVFDRMAGTWAYW
GWKGGYFDSEADAAAYRDEMCRMLADQMAAPNSPQWFNTGLHWAYGIDGPAQGHYYVDHV
TGELTRSATAYEHPQPHACFIQSVSDDLVNEGGIMDLWVREARLFKYGSGTGTNFSSVRG
EGEPLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEAYINWKVIE
EQKVAALVTGSKLANKHLNAVIKAASDLKVAEDDRFDPRRNPALKAAVKAARAALIPENY
VQRVIQFARQGYTELHIPVFNTDWDSEAYLTVSGQNSNNSVRVTDAFLNAVLADGEWTLT
RRTDGKSVRTIRAKDLWEQIGNAAWASADPGIQFDTTINDWHTCPAHGRINASNPCSEYM
FLDDTACNLASLNLMTFRREDGSFDIETYEHAVRLWTVTLEISVLMAQYPSATIAQLSYD
FRTLGLGYANLGGLLMASGLAYDSHEGRALSGALTAIMTGVAYATSAEMAKELGTFPKYA
PNAEAMLRVIRNHRRAAHGASEGYEQLSVAPVALDHANLPDPRLGDAARRAWDQALELGE
AHGFRNAQSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRTVPEALAK
LGYEEPRIRAIIDYAVGRGTLAGSPAIGHDALRARGFDDAAIERLEKSLGQAFELKFAFN
KWTLGAEFCRDALGFTDAQLDDPAFDMLQGLGFSKDEIEAANIWVCGAMTLEGAPGLEAR
HLPVFDCANPCGRKGTRYLSAEAHIRMMAAAQPFISGAISKTINMPNAATVEDCKAAYML
SWRLGLKANALYRDGSKLSQPLNAMILDDDVEDVEEAVAEFAARPAAEQARVVAERIVTQ
YISERQRLPHRRKGYTQKAVVGGHKLYLRTGEYEDGKLGEIFIDMHKEGAAFRSLMNAFA
IAISIGLQYGVPLDEYVDAYVFSRFEPSGMVEGNDAIKMATSVLDYVFRELAISYLGRTD
LAHVQPVQAADLLPDSVGRGVREGTREDGQGGTPVPAPAVAAAMGLASAGFVRSNLYVLR
GGAGGNTATAYAEPHDHAHAHEDLSPTAIGRAEVVDERLEAIRIARQKGFEGDPCGECGN
MTLVRNGTCLKCVTCGSTSGCS
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgcggatcgcccgcaagctcaccgtcgatggccgctccccttaccaggggatcgagatg
cggaccgccaccagcgaaatccgcaaccccgacggctcggtcgtcttcaagctcgagaat
atcgaggtgcccgcctcgtggtcgcaggtcgcctgcgacatcatcgcgcagaagtacttc
cgcaagcgcggcgttcccgccgtcacccggcgcgtgcccgaagagggcgtgcccgagttc
ctgtggcgttcggaacccgacgaggcggcgctggccgccctgcccgagggtgagcgctat
accggcgagcgcaccgccgcccaggtcttcgaccgtatggccgggacctgggcctattgg
ggctggaagggcggctatttcgacagcgaagccgatgccgccgcctatcgcgacgagatg
tgccggatgctggccgaccagatggcagcacccaactcgccgcagtggttcaacaccggc
ctgcactgggcctatggcatcgacggcccggcccagggccattattacgtcgaccacgtc
accggcgagctgacccgctcggccacggcctatgaacacccgcagccccatgcctgcttc
atccagtcggtctcggacgatctggtgaacgagggcggcatcatggacctttgggtccgc
gaggcgcggctgttcaaatacggctcgggcaccggcaccaatttctcgtcggtgcgtggc
gagggcgagccgctgtcgggcggcggccgctcgtcgggcctgatgagcttcctgaagatc
ggcgaccgcgccgccggcgctatcaagtcgggcggcaccacccgccgggccgcgaagatg
gtggtggtcgatgtcgaccatcccgatatcgaagcctatatcaactggaaggtgatcgaa
gagcagaaggtggcggcgctcgtcaccggctccaagctcgccaacaagcatctgaacgcg
gtgatcaaggccgcctcggatctgaaggtggccgaggacgaccgcttcgacccgcgccgc
aacccggcgctgaaggccgcggtcaaggccgcccgggcggcgctgatccccgagaattac
gttcagcgcgtcatccagttcgcgcgccagggttataccgaactccatatcccggtgttc
aacaccgactgggattcggaagcctatctgaccgtttcgggccagaactcgaacaattcg
gtgcgcgtcaccgatgccttcctgaatgcggtgctggccgatggcgagtggacgctgacc
cgccgtaccgacggcaagtcggtgcgcaccatccgcgccaaggatctgtgggagcagatc
ggcaacgccgcctgggcgagcgccgatcccggcatccagttcgacaccacgatcaacgac
tggcacacctgccccgcccacggccggatcaacgcgtccaacccgtgctcggaatacatg
ttcctcgacgacacggcctgcaacctggcgtcgctgaacctgatgaccttccggcgcgag
gacggctccttcgacatcgagacctacgagcatgcggtccggctgtggaccgtgacgctg
gaaatctcggtgctgatggcgcagtacccctcggcgaccatcgctcagctgtcctatgat
ttccgcaccctcggcctcggctatgccaatctgggcggcctgctgatggcctcgggcctt
gcctatgacagccacgagggccgcgccctgtccggtgcgctgaccgcgatcatgaccggt
gtcgcctatgcgacctcggccgagatggcgaaggaactcggcacctttccgaaatacgcg
cccaatgccgaggcgatgctgcgggtgatccgcaaccatcgccgcgccgcccatggggcg
agcgagggctatgagcagctgtcggtggccccggtggcgctggaccatgccaacctgccc
gatccgcgcctgggcgatgccgcccgccgcgcctgggaccaggcgctggaactgggcgag
gcccatggtttccgcaacgcccagtcgaccgtgatcgcccccaccggcacgatcggtctg
gtgatggattgcgacaccaccggcatcgagcccgatttcgcgctggtgaagttcaagaaa
ctggccggcggcggctacttcaagatcatcaaccgcaccgtgcccgaagcgctggcgaag
ctcggctatgaagagccgcggatccgcgcgatcatcgactatgcggtcggccgcggcacg
ctggccggctcgcccgccatcggccatgacgcgctgcgggcccgcggcttcgacgatgcc
gcgatcgagcggctggagaagtcgctgggccaggccttcgaactgaaattcgccttcaac
aagtggacgctgggcgccgagttctgccgcgacgcgctgggcttcaccgatgcccagctc
gacgacccggctttcgacatgctccagggcctgggcttctcgaaggacgagatcgaggcc
gcgaacatctgggtctgcggcgcgatgacgctggaaggcgcgccggggctggaagcccgg
cacctgccggtcttcgactgcgccaacccctgcggccgcaagggcacccgctacctgtcg
gccgaagcccatatccgcatgatggcggcggcgcagcccttcatctcgggcgcgatcagc
aagaccatcaacatgccgaatgcggccacggttgaagactgcaaggcggcctacatgctg
tcctggcgcctgggcctcaaggccaatgcgctctatcgcgacggctccaagctctcgcag
ccgctgaacgccatgatcctggacgacgatgtcgaggacgtggaagaggcggtggccgag
ttcgcagccaggcccgccgccgaacaggcgcgcgtggtggccgagcggatcgtcacccag
tatatcagcgagcgccagcgcctgccccatcgccgcaagggctatacccagaaggcggtg
gtcggcggccacaagctctatctgcgcaccggcgaatacgaagacggcaagctgggcgaa
atcttcatcgacatgcacaaggaaggcgccgccttccgcagcctgatgaacgccttcgcc
atcgccatctcgatcggcctgcagtacggcgtgccgctggacgagtatgtcgacgcctat
gtcttcagccggttcgagccctcgggcatggtcgaaggcaatgacgcgatcaagatggcg
acctcggtgctcgactacgtgttccgggaactcgcgatctcgtatctgggccgcaccgat
ctcgcccatgttcagccggtccaggccgccgacctgctgcccgacagcgtgggccgcggc
gtgcgcgagggcacccgcgaagatggtcagggcggcacgcccgtcccggcgccggcggtt
gccgcggccatggggctcgccagcgccggcttcgtgcgcagcaatctctacgtgctccgc
ggcggcgccggcggcaacaccgccactgcctatgccgagccccacgaccatgcccatgcg
catgaagacctgtcgccgaccgccatcggccgtgccgaagtggtcgacgagcgcctggag
gcgatccgcatcgcccgccagaagggcttcgagggcgacccctgcggcgaatgcggcaac
atgaccctggtccgcaacggcacctgcctgaaatgcgtcacctgcggctcgaccagcggc
tgctcgtga

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