Tremella mesenterica: TREMEDRAFT_14304
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Entry
TREMEDRAFT_14304 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_14304
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
TREMEDRAFT_14304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
tRNA_int_endo
Peptidase_M17
Motif
Other DBs
NCBI-GeneID:
18491084
NCBI-ProteinID:
XP_007005960
JGI:
Treme1_14304
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
EEEEEEDERVDLAMIQSFASKIQHLPTGEGSSRIKIHIPKRGEKDFEPLAETVNLQEMML
QRSREALFNALVGVRGGSSKAISHAVYDPTSEAPYPKMLITRGHIYDSLGIAVRKGKGKS
SVQLLPEESLYLLERGSLQIWVGPEGDDGIGQWDEEFQGVKGAVEMSVMEGYGNFLGREG
LTWERYQAYAYLKRLGYTVQRSRRFIPSHFLADPFTRHSNWLNQQNETLPPFRTWWSNLP
RWCSLAIRRFFQYSSALTANIAHVGLRLSSSIFPGPRRQFKGTLLQDWLGSTYPSLFSHL
RIIPTTHSAPLPLRPTSTAKDSIYSDLKTNPYIPFFHVWKPAVAFSKVRWDRGSAQGLIN
QPPDFFVAAVEARNTPMPSIHQLKDAWAQVREEPSGPIRRLGPQYENRKPNTRRFQSKEK
SRWERFTDWWRGSEPRKYQGGNMGVLRNGDRALVVAVNDSGNTGWVRFGRSGFAE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gaagaagaagaagaagaagacgaaagggtggatttagcaatgatacaaagtttcgcttca
aaaatacaacatttacctactggagaaggatcaagtagaatcaagatacatatacctaaa
cgtggtgaaaaagattttgaacctttagctgagactgtaaaccttcaggagatgatgctt
caacggtctagggaggcgctgtttaatgctttggttggggtgagaggaggaagtagcaaa
gccatttcacacgccgtatacgaccccacaagcgaagccccgtatcccaaaatgctcatc
acccgagggcacatttacgattctctcggtattgctgttcgaaagggtaagggcaagtca
agcgttcagcttttaccagaagaatctttgtatctcctcgagcgtggaagtttgcaaatt
tgggtgggtccggagggagatgatgggatcgggcaatgggatgaagaatttcagggggtg
aagggggcagttgagatgagtgtcatggaaggctatggaaattttctgggaagggaagga
ttgacatgggagagatatcaggcatatgcttacttgaaacgattaggatataccgtacaa
cgatcaagaagattcataccatctcatttcctggctgatcctttcacacgacactcaaat
tggcttaatcagcaaaacgaaactttacctcctttccgaacatggtggtcgaacctccct
cgttggtgttctcttgccatccgtcgattcttccaatattcttcggccttgacagcaaat
atcgcccacgtaggcctcagactttcctcctccatcttccctggaccacggcggcagttt
aaaggcacattactgcaggattggctcggatcaacttatccatctcttttctctcacctt
cgcatcatccccacaacccactctgctcctctacctcttcgtccaacatctacagccaag
gactctatatactccgacctgaagaccaacccctatatcccatttttccacgtatggaaa
cccgccgtcgcattctccaaagtcagatgggaccgaggatcggctcaaggtctaatcaat
caacctcccgatttcttcgttgcagctgtcgaagctcgtaatacacccatgccttccatc
catcagctcaaagacgcatgggcacaagtccgtgaagaaccttcaggtcctatacgaagg
cttggaccgcaatacgagaaccgcaaacctaacactcggcgcttccagtcgaaagagaaa
agtcgttgggaacggttcaccgattggtggagaggtagcgaaccgagaaagtatcagggt
gggaacatgggagtattgagaaatggagatagggctttggtagtggctgtcaacgattct
ggtaacaccggatgggttcgattcggtagatctggattcgccgag
DBGET
integrated database retrieval system