Tremella mesenterica: TREMEDRAFT_25267
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Entry
TREMEDRAFT_25267 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K22399
pachytene checkpoint protein 2
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tms03036
]
TREMEDRAFT_25267
Chromosome and associated proteins [BR:
tms03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
TREMEDRAFT_25267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_TRIP13_C
TRIP13_N
AAA_16
AAA_22
AAA_18
nSTAND3
AAA_25
Viral_helicase1
ATPase_2
AAA_33
Cytidylate_kin
AAA_2
NPHP3_N
TsaE
RuvB_N
Rad51
AAA_28
AAA_5
RNA_helicase
AAA_11
ABC_tran
NACHT
TIP49
DUF815
AAA_14
bpMoxR
KTI12
AAA_24
AAA_17
AAA_30
AAA_7
SLFN-g3_helicase
IstB_IS21
AAA_19
Rad17
nSTAND1
Mg_chelatase
SPC25
CPT
AAA_3
PduV-EutP
SKI
AAA_13
Motif
Other DBs
NCBI-GeneID:
18491477
NCBI-ProteinID:
XP_007000611
JGI:
Treme1_25267
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
VEVRLLPYASVRPELIPTAVRALIESGDNALLLGPLTEWEHISILQRNVEQIIVAEFDPP
VPNVLLRNAHVNIHLYRPVNISENLAAELDGDDQESVSAATIIDLPAQSLEGLWENLIYP
PPLKSTLLNMVRTSMVLGDLGVNPNIVALNRLVLLHGPPGTGKTSLCRALAQKLSIRLSD
TYAHGKLVEINSHSLFSKWFSESGKLVQKLFSSVMEMVEREDCFVVVLIDEVESLTIARD
SFSGASEPGDALRVVNALLTQLDKLRSKTNVLVLTTSNLSHTIVSDKAFIDRADIKEYVP
PPIPEAIYWILRTTLVELMNRGLVQQLDLPLWNLIAMSKVRAQKGEAKEGQKVGIDLARV
AQECHSHGLSGRFLRRIPALALAIHFRGRTRPRSCERWVEAFFKVIENEVSDRRKIAREE
VSTIDSKNIPINLSPSIMSSGQP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtcgaagttcgtcttctaccttacgcatccgtccgaccggaactcatccccactgccgtc
cgagcgttgatagaaagtggagacaatgcacttctcttagggccgttgactgaatgggaa
catatctccatcctgcagaggaacgtggaacaaatcatagtggcggaatttgatcctcca
gtgccgaacgtacttctgcgaaatgcacatgtgaacatacatctctatagacctgtgaac
atcagtgagaatctcgctgcagaattggatggcgacgatcaagaatcagtctccgcagct
acgatcatagatcttcctgctcagtctcttgaaggtttatgggaaaatttgatctatccc
cctccactcaaatcgacgctgctcaatatggttcgaacatctatggttctaggggatctc
ggtgtgaatcccaacattgtcgctttaaaccgtttagttctcttacacggtccacccggg
acgggtaaaacgtcgttatgtcgagcattggctcaaaagctgtccattcggttgtcagat
acatacgcacatggcaagttagtggagataaattctcattctttattctccaaatggttc
tccgaatccggtaaattggttcagaaactattctcaagtgttatggagatggtcgagagg
gaagattgtttcgtcgttgtgctcatagatgaagtggaatcactcacaatcgcacgagat
tcattttctggcgccagtgaacctggcgatgctctaagagttgtaaatgcgctgttaacc
cagctggacaagctccggtccaagacgaatgttttggttctgaccacgtcaaatttatca
cataccatcgtttcagataaggcattcatagatcgtgccgatataaaagaatacgttcct
cctcctatcccagaagccatttactggattttacggacgaccttggtagagctcatgaac
cgtggattggttcagcagttggatctgccactttggaatttgatagctatgtcgaaggtc
agagctcagaagggggaggcgaaggagggacagaaagtagggattgatttagccagagtg
gctcaggagtgtcattctcatggtctatcaggtcgttttctccgccgtatcccagctctg
gcactcgccattcatttccgcggtcgaactcgtccccgatcctgcgaaagatgggtcgag
gcttttttcaaagtgatagaaaatgaagtgtcagatagaagaaagatcgcacgggaagaa
gtgtcgaccattgattcaaagaatattccaatcaatctttctccatcaataatgtcttct
gggcaaccttaa
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integrated database retrieval system
