Tremella mesenterica: TREMEDRAFT_27331
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Entry
TREMEDRAFT_27331 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K08490
syntaxin 5
Organism
tms
Tremella mesenterica
Pathway
tms04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
TREMEDRAFT_27331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_27331
Membrane trafficking [BR:
tms04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
TREMEDRAFT_27331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Syntaxin
DUF16
DUF2207_C
NPV_P10
Motif
Other DBs
NCBI-GeneID:
18491751
NCBI-ProteinID:
XP_007002341
JGI:
Treme1_27331
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MPAKDRTAEFHSTLNSIKSRTALPKPTKDVKQPLLKEAGPSRGAGGKSEFGRMAGAIAKD
INSTTLKLQKLAQLAKRKTLFDDRPIEISELTYIIRQDIASLNTQIASLQSYVRAQKPTQ
SSGGKGQVEEHNSNVVMLLQSRLADMGMGFKDVLELRTQNMKASKDRSEQFMHTAASSSV
PPPTNSLLMPTAAKTGPGAGFPADRKGKSRAANGNGVDDVDFLALDIDGDRGESGRGGGE
YQQMQLVEQQQDSYIQSRSTAIESIESTIAELGQIFSQLAGMVAEQRETVQRIDADTTDI
AANVSGAQRELLKYYASVTSNRWLMLKIFGVLIIFFLVFILVS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaagatcgtacagcagaatttcactcaactttaaattctataaaatctcgt
acagctttacccaaaccgacaaaagatgttaaacaacctttactcaaagaagccggaccg
agtagaggtgcaggggggaaaagtgagtttggtaggatggctggggcaatagcaaaggat
ataaattctactactttgaaattacagaaacttgctcagttggcaaaacgaaaaacacta
ttcgatgatagaccgatagaaatatcagaactcacatatataataagacaagatatcgct
tccctaaacactcaaatcgcctctttacaatcttacgtccgagctcaaaaacctacgcaa
agttctggaggaaaaggtcaggtagaagaacataatagtaatgtggtaatgttacttcag
agtcgattggcggatatgggtatgggatttaaggatgttttagagttgagaactcagaac
atgaaagcgagcaaagatcgatctgaacagtttatgcacactgcagcttcttctagtgtc
ccccctccaaccaactccctcctcatgcccacagccgccaaaacaggccctggcgctggg
ttccccgccgatagaaaaggaaagtctcgcgccgccaacgggaatggtgtggacgacgtc
gatttcctcgctctggacattgatggggatcggggagagagtggaagaggtggaggagag
tatcaacagatgcagttggtagaacagcagcaggactcttatattcaatctcgatctacc
gctatagaaagtatagaatctaccattgcagaattaggtcaaatattttcacaattggca
gggatggttgcggagcagagagagacggtacagcgtattgatgcggatacgacggatata
gctgcaaacgtctctggtgctcaacgagaattattgaaatattacgcttctgtcacttcc
aacagatggcttatgcttaagatttttggcgtcttgataatattcttcttagtcttcatc
cttgtttcatag
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