KEGG   Tremella mesenterica: TREMEDRAFT_29558
Entry
TREMEDRAFT_29558  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
tms  Tremella mesenterica
Pathway
tms03022  Basal transcription factors
tms03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TREMEDRAFT_29558
  09124 Replication and repair
   03420 Nucleotide excision repair
    TREMEDRAFT_29558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tms03021]
    TREMEDRAFT_29558
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_29558
Transcription machinery [BR:tms03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     TREMEDRAFT_29558
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     TREMEDRAFT_29558
SSDB
Motif
Pfam: Tfb5 PSV_ORF131-like_dom
Other DBs
NCBI-GeneID: 18492006
NCBI-ProteinID: XP_007003837
JGI: Treme1_29558
LinkDB
Position
Unknown
AA seq 73 aa
MSTYSDPYAVKLTSGVLITCDSAAKQILLHIDSQRDGPSKFILRDIDETHVLVKKEHIEI
MKDLLQVEVSFLS
NT seq 222 nt   +upstreamnt  +downstreamnt
atgagcacttattccgatccatatgctgtcaagctaacttccggcgttctgatcacttgt
gactcggcagctaaacaaatattattacatatcgattctcaacgcgacggaccgagtaaa
ttcattttacgggatatcgatgaaacacacgttttggtcaagaaagaacatattgaaatt
atgaaagatcttcttcaagttgaagtcagttttctctcttga

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