Tremella mesenterica: TREMEDRAFT_32705
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Entry
TREMEDRAFT_32705 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_32705
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_32705
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_32705
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_32705
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
TREMEDRAFT_32705
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TREMEDRAFT_32705
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TREMEDRAFT_32705
Prokaryotic type
Other AARSs
TREMEDRAFT_32705
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TREMEDRAFT_32705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
18492365
NCBI-ProteinID:
XP_007005982
JGI:
Treme1_32705
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
GPRSRITHSCSELNLGMVDTDVVLGGWLFSQRRASENLHFFTLRDSTASVQLVSRQSEVS
KILMDLPLESVIQIHGKVKPRKAKGKAEMSERREVVDVEVEVLAVIVLNPAEELPFYPSR
GEIANEDLRAQYRYLDLRRPELSNNLKLRSRVSHIIRSYLHDLGFTEVDTPILLQSSPEG
AREFLVPTRNPSPTGDPTFYALQQSPQQPKQLLMASGAIDRYFQIARCFRDEDGRKDRQP
EFTQVDLEMAFVNGGQMYVEGETRSTWGMGGQEVRDVVEGLVKRIWKEVKGEELEGWFRV
MPYDVAMDVYGSDKPDTRFEMYTLPLGYYPTLSDGDIDRILLDESQYTVEWMITPAQQAE
SLDIASLVGTNSFIDHVKISNANLFTWHKESPLTQRLNLRLDPSLPGGVGVGDIIWLAQR
KKIPEGGWTQLGRLRVTIMDMLVSKGIITLPSTPHFLWITQFPLFTHADEDKLHLSKGRW
SSTHHPFTAPLFEDLSDLKAGKVDKVRGQHYDLVLNGQEIGGGSVRIHDSYLQEYVLREV
LKLNQDEISRFSHLLQALKFGAPPHGGIALGFDRLVAILAGTNSIRDVIAFPKTGTGQDP
VFKSPSTSTEEVLKEYGLIPLRSPKRA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ggcccgagaagtcgcatcacgcattcttgctccgagctgaatttgggcatggtggatacg
gatgtggtcttgggtggttggcttttctctcagagacgagcatctgagaaccttcacttt
tttactctccgggattcgacagcctcagtgcagcttgtctcgcgccaatctgaggtttcc
aaaatcctcatggacctccctctggaaagtgtcattcaaattcacgggaaggtcaaacct
cgaaaggccaaagggaaagcagagatgagtgagaggagagaggttgttgatgtcgaggtg
gaggtgttagcggtgattgtacttaatcctgctgaggaactccctttttatcccagtaga
ggggagatagccaacgaagatttacgagctcaatatcgatacctcgatcttcgaagaccc
gaactctccaacaatctcaaacttcggagtcgtgtttcgcatatcatcaggtcttatttg
catgacctaggcttcacagaagtcgacaccccaattctactccaatcttcccctgaaggc
gcacgggaattcctcgtccctactcgtaatccgtcacccaccggagaccccacattctac
gccctacagcaatctcctcaacaacccaaacaactattgatggcttccggagccattgat
cgatacttccaaatcgcgcgctgtttccgagatgaagacggacggaaagatcgacaaccg
gaattcacgcaggttgatttagaaatggcttttgtgaacggaggacagatgtatgtggaa
ggagagacacgaagtacttggggtatgggtgggcaggaagtacgggatgtggtagaaggt
ttagtgaaacggatctggaaggaagtaaaaggtgaggaattggaaggttggtttagggtc
atgccttatgacgttgccatggatgtgtatggctcagataaaccggatacgaggtttgaa
atgtatacgctacctctagggtattaccccactctctcggatggcgatatcgatcgtata
cttctggacgaaagtcagtacacagtggaatggatgatcacacctgcacagcaagccgaa
tcgctggacatcgcgtctttggtcggaaccaacagttttatcgatcatgtgaagatatca
aatgccaatcttttcacgtggcataaagagtcacctttgacccagaggctgaaccttcga
ttggacccgagtttaccgggaggagtgggggtaggggatatcatctggctagctcagagg
aagaaaataccagagggaggttggacgcaacttggcagattacgagtgactataatggac
atgttagtttcgaaagggatcatcacactcccatccactccccatttcctatggatcaca
caattccctttattcacacatgcagacgaagataaacttcatctttctaaaggaagatgg
agtagcacccatcatccattcaccgccccattattcgaagatctttcggatctcaaagcg
ggcaaagtggataaagtcaggggacaacattacgatttagttttgaatggtcaagagatt
ggtggaggtagtgttaggatacatgattcgtatttacaggaatacgttttgagagaggtt
ttgaaattgaaccaagatgaaatctcaagattttctcatttacttcaagctcttaaattt
ggtgctcctccgcatggcgggatagctctgggtttcgaccgtctcgtcgccattttagca
gggacaaactctattcgagacgttatcgcgtttcctaaaactggtacgggacaagatcca
gtgttcaaaagtccttcgacctccacagaggaggtattgaaagaatatgggttgattcct
ctcagatctcctaaaagagcatga
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