Tremella mesenterica: TREMEDRAFT_34372
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Entry
TREMEDRAFT_34372 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tms
Tremella mesenterica
Pathway
tms00511
Other glycan degradation
tms00513
Various types of N-glycan biosynthesis
tms00520
Amino sugar and nucleotide sugar metabolism
tms00531
Glycosaminoglycan degradation
tms00600
Sphingolipid metabolism
tms00604
Glycosphingolipid biosynthesis - ganglio series
tms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
TREMEDRAFT_34372
09103 Lipid metabolism
00600 Sphingolipid metabolism
TREMEDRAFT_34372
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
TREMEDRAFT_34372
00531 Glycosaminoglycan degradation
TREMEDRAFT_34372
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
TREMEDRAFT_34372
00604 Glycosphingolipid biosynthesis - ganglio series
TREMEDRAFT_34372
00511 Other glycan degradation
TREMEDRAFT_34372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tms03110
]
TREMEDRAFT_34372
Enzymes [BR:
tms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
TREMEDRAFT_34372
Chaperones and folding catalysts [BR:
tms03110
]
Intramolecular chaperones
Others
TREMEDRAFT_34372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
18492578
NCBI-ProteinID:
XP_007007005
JGI:
Treme1_34372
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MSLHLTIILVVIATLGYSLSLHLGENIISDQLNVVEPTTGKLNVWPLPTSFTTGTSILCL
SNNFNISIPHDTPEDLTRAVERTRKRLHDNTHRYLSVRRGEEFFQFKGCDSYSNSLQLLF
TEQDDDKRNDMETRERKRKSIMDQVNYPLEDRLELEGYNLTVSMDGKAELVALGALGLFR
GLSTFEQLFYYLPGSHPSSIITQIPLERIHYAPFAPYHISDKPAFPWRSVLLDTSRHFIP
LHFILKTLDTMALVKVVIGHITDSNSWPLQLSSFPELSKPWEPEVYTEEEVKEVIRYGGE
RGIDVILEIDTPGHTASIGTSHPEKVACLESAPWNKYANEPPTGQLRFALSEVAEWTAGL
FEKIISLTRGRYFGTGGDEINIACMLGDPPTVARLQEMGWTLDDALDEFVNITHGAVREA
GATPVVWQEMVLDHGDLTSLKNDTIVAVWIQASDAQRVVEKGYRVILASADYFYLAIDCG
QGSWIAQQGGGNSWCDPFKSWQRIYSFDPSVWVTPDKFDQVLGEGQTSLWTEQTDETNFE
STLWPRAAALVEVFWTGGPYPLDSKVAMERMNDIRYRLVSLGISASPVQPHWCALRPGSC
DA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcatttgacaataatactggtggtcattgcgacactaggatactccttatct
cttcacctaggtgagaatattatctcggaccaattgaatgtagtggaacccacgacgggg
aaactaaacgtatggcccctccctacgtccttcacgaccggaacatcaatcttatgtctc
tcaaacaatttcaacatttctataccacacgatactcctgaagatctcactcgagctgta
gaaaggactcgaaaaagactacatgataatactcatcgttatctatctgtacgaagagga
gaagaattctttcaattcaaaggttgcgatagttattcaaacagtttacaactcctcttc
actgaacaagacgacgacaaaagaaatgatatggagacaagagaaagaaagagaaagtca
atcatggaccaagtcaattatcccctggaggacagattggagttggaaggatataacttg
actgtttctatggatggaaaggctgaactggtcgctttaggagctttgggtttgttcaga
ggtttgtcaacttttgaacaattgttttattatctaccgggatctcatccttcttcaatt
attactcagatacctttggaaagaatacattacgctccatttgcaccttatcatatctcc
gataaacctgctttcccatggagatcagttttgttagatacttctagacatttcatccca
cttcattttattctaaagactctggacactatggccttggttaaagtagtaattgggcat
atcacagattctaattcatggcctctacaactgagttctttccccgaactttccaaaccc
tgggaaccggaggtgtatacagaagaagaagtcaaggaagttatacgctacggcggagag
agaggtatcgacgtcatactagaaattgacacccccggtcatacagcctctataggaaca
tcacatcctgagaaagtagcgtgtctcgaaagtgcaccatggaataaatacgcaaatgaa
cctccaacaggacaattacgtttcgctctttccgaagtggccgaatggaccgccgggttg
tttgagaagatcatcagtttgactagagggaggtattttgggacagggggagatgagata
aatattgcttgtatgttgggagacccacctactgtcgcacgattgcaagaaatgggttgg
actcttgatgatgctttggacgagtttgtcaatattactcatggtgctgtgagagaagca
ggagctactccggtagtatggcaagaaatggtattggaccacggcgatttgacttctttg
aagaacgatacaatagtggcagtatggatccaggcttccgacgctcagcgggtggtggag
aaaggttatcgggtgattcttgcatctgcagattacttttacctggcaattgattgcgga
caaggttcttggatcgcacaacaaggaggtggaaatagttggtgtgatcctttcaaatct
tggcaaagaatatattctttcgacccctcggtttgggtaactcctgataaatttgatcaa
gtacttggagaaggtcaaacgagtttatggacggaacaaactgatgagacaaatttcgaa
tccactctttggccaagagcggcggctttagtagaagtattttggactgggggaccttat
cctttagactcaaaagtagcaatggaaaggatgaacgatattcgatatcgacttgtctcc
cttggtatttcagcttcgcctgttcaacctcattggtgtgctcttagacctggttcttgt
gatgcgtaa
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