Tremella mesenterica: TREMEDRAFT_44762
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Entry
TREMEDRAFT_44762 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_44762
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_44762
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_44762
03029 Mitochondrial biogenesis [BR:
tms03029
]
TREMEDRAFT_44762
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
TREMEDRAFT_44762
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class I (G)
TREMEDRAFT_44762
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TREMEDRAFT_44762
Prokaryotic type
Other AARSs
TREMEDRAFT_44762
Mitochondrial biogenesis [BR:
tms03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TREMEDRAFT_44762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
DNTTIP1_dimer
Motif
Other DBs
NCBI-GeneID:
18493665
NCBI-ProteinID:
XP_007005715
JGI:
Treme1_44762
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MTSVAPPIVTSSHIPTSSKYQLPQLPSIPAANPQRQILDAFRLAAASLIAEAWGEDPAKI
FEGCDVGKKGADLAVAIPRFKKGKPDEWAAKVLEAFQPSNYLSKVSFEKPFLAFTFNKES
FTYHVLRQIQLCSLAARQEPSNPTLPYGAVNENEGKLMVIDFSSPNIAKPFHAGHLRSTI
IGAVISNMHEAFGWKVKRINYLGDWGTQYGKLSIGFDRYGSEEELVKDPIKHLFKVYVKI
NEDDAAEKARYNAGEEIDSETTVHALAKKVFKDMEDGEPKAIAQWSRFRDLSIEALVGVY
DKLNIHFDEYWGESQVRKESMQRAIDICLEKKLTCEDRGALLVDLMEWKMDRAIIRKADG
TTIYLTRDLGGAYDKYEKYHFDKHIYVVQAAQSLHFRQLYKTLELMEEPYYKEGVFEHVS
FGMVNGMSTRKGTVVFLDDILEEAKEVMHEQMRSNEEKYRQIEDPETTSAIIGQTAVKIQ
DLSGKRVNDYTFNMQRCTSFEGDFGPFIQYSHVRLCSVQRKNPNVPIASSSDDIDISILS
DPKIYDMIYHLSIFPTTLRTAYTNNEPSTLVHWCFKISHLVGAAWESVKVSGAEEEEAKA
RLFLYLRTREVLAYAMRLLSLTPIERM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtcgctcctcccatagtgaccagcagtcacatacccacctcttcaaaatac
caacttccgcaactcccttccatacccgctgccaacccacagcgacaaattctggacgca
tttcgactcgctgctgcgagtttgatagctgaagcatggggggaagaccctgcgaaaatc
ttcgaaggatgtgatgtggggaagaaaggtgcagatttggctgtagctatccctcggttc
aaaaaaggtaaaccggatgaatgggccgcaaaggttctggaagcgtttcaaccttcgaat
tacctctcaaaggtgtctttcgaaaagccatttttggcgtttactttcaacaaagaatct
ttcacttaccatgtcctccgtcaaatccaactctgttccctcgctgctcgtcaagaaccc
tccaaccctacccttccatacggtgccgtcaacgagaacgaagggaaactcatggtcatc
gatttctcctctccaaacattgccaaacccttccatgccggtcatcttagatctaccatt
ataggtgccgtcatctccaacatgcacgaagcgtttggttggaaggtgaagcggatcaac
tacttgggtgattggggtactcagtatgggaaattgtcaatcggttttgatcggtatggg
agtgaggaggagctggtcaaggaccctataaagcatttgttcaaggtgtacgtcaagatc
aacgaggatgacgcggcggagaaggctcgatataacgccggtgaggagatagactcggag
accaccgtccatgcgctagcgaaaaaagtattcaaagatatggaagacggcgaacccaaa
gctatcgcacaatggtctcgattcagagatctctccatcgaagccttggtaggcgtctac
gacaaactcaacatccattttgacgaatattggggtgaatcgcaagtccggaaagagtct
atgcaacgtgccatcgacatttgcctcgagaagaaattgacttgcgaagacagaggtgct
ctcctggttgatttgatggaatggaaaatggacagagccattattcgtaaagcagacgga
acgaccatttatctcactcgtgacctaggaggtgcttatgacaaatacgaaaagtatcat
ttcgacaaacacatttacgttgttcaagctgctcaatcactccatttccgacaattgtac
aagactttggaattgatggaagagccttattacaaggaaggagtgttcgagcatgtgagc
tttgggatggtgaatgggatgagcaccaggaaagggactgttgtgttcctagatgatatc
ttggaagaagcgaaggaggtgatgcatgagcagatgagaagtaatgaggagaagtataga
cagatcgaggatccagaaacgacttcggcgattattggacagactgctgtgaagatacaa
gatttgtctgggaagagagtcaacgactacacgttcaacatgcaacgttgcacctcattc
gaaggagatttcggaccttttattcaatattcgcacgttcgtctttgttcagtccaacgt
aaaaacccaaacgttccaatcgcatcatcatcagatgatatcgatatatccatcttatcc
gaccccaaaatatacgatatgatctatcatctatccatcttcccgaccactctccgaacg
gcatatacgaataacgaacctagcacgttggttcattggtgtttcaagatctctcatttg
gtaggagcggcatgggaaagtgtcaaagttagtggagcggaggaagaagaggcaaaagcg
agattatttttgtatcttcgaacgagggaggttttggcctacgccatgaggttgttaagt
ttgacacctatcgagaggatgtga
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