KEGG   Tremella mesenterica: TREMEDRAFT_59866
Entry
TREMEDRAFT_59866  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
tms  Tremella mesenterica
Pathway
tms03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TREMEDRAFT_59866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tms03400]
    TREMEDRAFT_59866
Enzymes [BR:tms01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     TREMEDRAFT_59866
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     TREMEDRAFT_59866
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     TREMEDRAFT_59866
DNA repair and recombination proteins [BR:tms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     TREMEDRAFT_59866
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     TREMEDRAFT_59866
SSDB
Motif
Pfam: zf-C2HE DcpS_C HIT zf-C2H2_FBX41
Other DBs
NCBI-GeneID: 18494881
NCBI-ProteinID: XP_007001842
JGI: Treme1_59866
LinkDB
Position
Unknown
AA seq 239 aa
MSKKTSNFPLQILREYAKVRSPARNIPPSVLLSHTPYVMSIHDAYPKSKYHFLILPRFPY
PPEADLERDKSILPLGVFDSLETFLMKGGEHRWTVLQQMVNMARDVEEMIRDEMFKTEGF
TWKIYMGFHAVPSMNHFKTKKHHNSFRPDLGFFVPLASVEGWIKMGDEESIRRHVSELNS
SEILLSSPLSCFRCDESFGNMPELKRHLEGEFQARKKKALKEIATTGRQRDSDVSSEES
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtcaaaaaaaacctccaatttcccacttcaaatattaagagaatacgcaaaagtccga
tctccagccagaaacattccaccttccgtactgctctctcacacaccttacgtcatgtca
atccacgatgcatatcctaaatctaaatatcattttttgatcttacctcgatttccttac
ccacccgaggctgatctagaaagagataaatctatcttaccattaggagtgtttgatagt
ttagaaacttttttgatgaagggtggagaacatcgatggacggttttacaacaaatggtt
aatatggcaagagatgtggaagagatgataagggatgaaatgtttaaaacggaaggattt
acttggaagatttatatgggttttcatgctgttccttctatgaatcacttcaaaactaaa
aaacatcacaattcattccgtcccgatttaggtttcttcgtacctttagcctctgtagaa
ggatggataaaaatgggggatgaagaaagtattcgacggcatgtcagtgaattaaattca
tccgaaattctcctttcctcacctttatcttgtttccgttgtgatgagtcatttgggaat
atgccagaacttaaaagacatttagaaggggagtttcaagctaggaagaagaaagctttg
aaggagattgcaactacggggagacagagggatagtgatgtgagcagtgaagagtcgtag

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