Trichechus manatus latirostris (Florida manatee): 101351696
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Entry
101351696 CDS
T05135
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03410
Base excision repair
tmu05166
Human T-cell leukemia virus 1 infection
tmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101351696
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101351696
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101351696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101351696
Enzymes [BR:
tmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101351696
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101351696
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
101351696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
101351696
NCBI-ProteinID:
XP_004382142
UniProt:
A0A2Y9DVP0
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIESGAEAK
KLPGVGTKMAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEIKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLEKVHFITDTLSKGETKFMGVCQ
LARENDEKEYPHRRIDIRLIPRDQYYCGVLYFTGSDIFNKNMRTHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccacaggagacgctcaacgggggcatcaccgacatgctcacg
gaactcgcaaactttgagaagaacgtgaaccaggctatccacaagtacaacgcttacaga
aaagcagcatctgtgatagcgaagtacccacacaaaatagagagtggagcagaagctaag
aaattgcctggagtaggaacaaaaatggctgaaaagattgatgagtttttagcgactgga
aaattgcgtaaactggaaaagattcggcaggatgatacaagttcatccatcaatttcctg
actcgagttactggaattgggccatctgctgcaagaaagtttgtagatgaaggaattaaa
acattagaagatctcagaaaaaatgaagataaattgaaccatcatcagcgaattgggctg
aaatattttgaggactttgagaaaagaatccctcgtgaagagatgttacaaatgcaagat
attgtactgaatgaaattaaaaaagtggattctgaatacattgctacagtttgtggcagt
tttagaagaggcgcagagtccagtggtgacatggatgttcttctgacccatccaagcttt
acttctgagtcaaccaagcagccaaaactgttacatcgagttgtggagcagttagaaaag
gtccattttattacagacactttgtcaaagggtgaaacaaagttcatgggtgtttgccag
cttgctagagaaaatgatgaaaaagaatatccacacaggagaatcgatatcaggttgata
cccagggatcagtattactgtggtgtgctctatttcactgggagtgatattttcaataag
aatatgagaactcatgccctagaaaagggttttactatcaatgaatacacaatccgtccg
ttgggagtcactggagttgctggagaacccctgccagtggatagtgagaaagacatcttt
gactacatccagtggaaataccgagaacccaaggaccgaagcgagtga
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