Trichechus manatus latirostris (Florida manatee): 101354044
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Entry
101354044 CDS
T05135
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03250
Viral life cycle - HIV-1
tmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101354044
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101354044
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101354044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101354044
03110 Chaperones and folding catalysts [BR:
tmu03110
]
101354044
04121 Ubiquitin system [BR:
tmu04121
]
101354044
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101354044
Chaperones and folding catalysts [BR:
tmu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
101354044
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101354044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Zn_ribbon_RanBP
Pro_isomerase
WH1
TPR_1
TPR_2
TPR_14
TPR_8
ANC1_spectrin
TPR_16
ARM_TT21_C
TPR_11
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
101354044
NCBI-ProteinID:
XP_004369350
UniProt:
A0A2Y9D7N9
LinkDB
All DBs
Position
Unknown
AA seq
3043 aa
AA seq
DB search
MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP
KAHRFLGLLYELEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPTIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDVHVNIRLVELYRSNNR
LKDAVAHCHEAERNIALRSSLEWNSCVVQTLKDYLESLQCLDSDKSNWRITSRDLLLAYA
NLMFLTLSTRDVQECRELLESFDSALRSVESSVGGNDELSATFFEMRGHFYMHAGSLLLK
MGQHSDVQWRALSELAALCYLIAFQVPRPKIKLMKGEAGQNLLEMMAYDRLSQSGHMLLN
LSRDKQDFLKEVVESFANKSGQSALYDALFSSQSSKDRSFLGSDEIGNINVQAPEPDDLA
RYDVGAVRAHNGSLQHLTWLGLQWSSLPTLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSHLQLEERCNSYYNSYQPLCLALPVCKQLCTERQKSWWDAVCSLIH
RKVIPGTSAKLRLLVQHEINTLRGQEKHGLQPALLIYWAKCLQKTGSELNSFYDQREYIG
RSVYYWKKVLPLLKTIKKKTSIPEPIDPLFKHFHSADIQVSEIGDYEEEAHITFAILDAV
NGNTEDAMTAFESIKNVVSYWNLALIFHRKAEDIENDALSLEEQEECKNYLRKTRDYLIK
ILDDSDSNPSVIKKLPVPLESVKEMLNSVMQELEDYSEGGLLYKNGSLRNADSEMKHSTP
SPTKYSPSPSKSYKYSPKTPPRWAEDQNSLLKMICQQVEAIKKEMQELKLNTSNSASSHR
WPTENYGPDSVPDGYQGSQSFHGAPLTIATTGPSVYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYACSQQMHTPPVQSSSACMFSQEMYGPPLRFESPATGILSPRGDDY
FNYSVQQTSTNPPLPEPGYFTKPPVAAHASRSAESKVIEFGKSNFVQPVPSEGIRQSLTT
SAHTTQPTPFKFNSNFKSNDGDFTFSSPQVVTQPSSTAYNNSESLLGLLTSDKPLQGDGY
SGPKPVPGQTIGPRNTFNFGSKNLSGISFAENMGPNQHKNSGFRRSDDMFTFHGPGKSVF
GTPAPELANKNREADGGSAHGDEDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLF
RFDTESKEWKERGVGNVKILRHKTSGKLRLLMRREQVLKICANHYISPDMKLTPNAGSDR
SFVWHALDYADELPKPEQLAIRFKTPEEAALFKRKFEEAQSILKASGANAATSTNQTIRI
VNEPTSRDNKDICKSDAGNLNFEFQPAKKEGSWWNCSSCSLKNAATAKKCVSCQNLNPSD
KELLGPPLVETVPTLKTGLESMQDRFALTPQKKEGHWDCNTCLVRNEPTASRCIACQSTK
VASKSGSSFVQPSSFKFGQGDLPKSVSSDFRSVFPTKEGQWDCSGCLGLNEGSATKCVAC
QKPRKQSQPYVSAPVSFKFGTSETSKASKSGFEDMFAKKEGQWDCSVCLVRNEANATKCI
ACQNPSKQNQPTTAVPVPASSETSKAPKSGFEGMFTKKEGQWDCSVCSVRNENSSLKCMA
CDASKPTHKTTAETPSAFTLGAKTKLSDPSRSQVGTGFKTDFSEKGFKFGSTEQGFKFGH
VDQENTPSFTFQSSNKESKSTKEEFNFSIPVSADGFKFGIQDSGNQEKKSENEKPFESDT
GFQAQDVSNQKNGSGLIFGQTNSTFTFADLAKSTSEEGFQFGKKDPDFKGFSGAGEKLFS
SQSGKMVDKASTSADLEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRV
KLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSG
SDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDT
GRAAKLIQRAEEMKSGLKDFKTFLTNDQTKVTDEESTSSGSGAVSASDAAIKPNPESTGP
ALEWDNDDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKS
PAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLY
RYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMALQAMKGTER
VWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKIAQEKDSLITPYVSRSATPR
ESPCGRIAVAVLEETTRERTDLTQGDDVADAASEVGEVSSTSETTTKAVVSPPKFVFGSE
SVKSIFSSEKSKPFAFGNSSATGSLFGFSFNAPLKNNNSETSSVVQSGSERKVESNKCEL
SKNSNTKESSDGKAKNLFASTSKEESSTNYVFKTPEKAKEEKKPEDPPSDDEILIVYELT
PTPEQKALADKLKLPATFFCYKNKPDYVSEEEEDDEDFETAVKKLNGKLYLGDSEKCRTS
EENQADNEKECVIVWEKKPTLEEKAKADTLKLPPTFFCGVCSDTDEDNGNGEDFQSELQK
VQEAQKSHGEELTEVTSTADSVCTDGTKVTVPFFYKSEEPDSMNKSVSSAPISSGTEDKP
VDLSTKKENDADSTSQVESKTVPFGFGSSTGLSFADLASSTSGDFAFGSKDKNFQWANTG
AAVFGTQSTSKVGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLY
RWDRDVSQWKERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNN
ALVWTASDYADGEAKVEQLAVRFKTKEMADCFKKKFEECQQNLLKLQKGQVSLAAELSKE
TNPVVFFDVCADDEPLGRITMELFSNIVPHTAENFRALCTGEKGFGFKNSIFHRIIPDFI
CQGGDITKHDGTGGRSIYGENFEDENFDVKHTGPGLLSMASRGRDTNNSQFFITLKKAEH
LDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSQRISITECGQI
NT seq
9132 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggctgacgtcgagcggtacatcgcctcggtgcagggctctgccccg
tcgcctcgagagaagtcaatgaaaggattctattttgcaaagctgtactatgaagctaaa
gaatatgatcttgctaaaaagtacatatgtacatatattaatgtacaagagagggatccc
aaggctcacagatttctgggtcttctttatgaattagaggaaaacatagacaaagctgtt
gaatgttataagcgttcagtggaattaaacccaacacaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaatgatgtcacagatggaagagcaaaatactgggttgaaaga
gcagctaaacttttcccaggaagtcctacaatttataaactaaaggaacagcttttagac
tgtaaaggtgaagatggatggaataaactttttgacttgattcagtcagaactttatgca
agacctgatgatgtccatgtgaatatccggctagtagaactgtatcggtcaaataataga
ttgaaggatgccgtggcccattgccacgaggcagagagaaacatagctttgcgttcaagt
ttagaatggaattcatgtgttgtgcagacccttaaggactatctggaatctttacagtgc
ttggactctgataaaagtaactggcgaataaccagtagagacttacttctggcctatgct
aaccttatgtttcttacactttccactagagatgtgcaggaatgtagagaattactggaa
agctttgatagtgctcttcggtctgtggaatcttctgtaggcggaaatgatgaactctca
gctactttcttcgaaatgagaggacatttttacatgcatgctggctctctgcttttgaag
atgggtcagcatagtgatgtacaatggcgagctctctctgagctggctgcactgtgttat
ctcatagcatttcaggttccaagaccaaagattaaactaatgaaaggagaagctggacaa
aatctattggaaatgatggcctatgatcgtctgagccagtcagggcacatgctgctaaac
ttaagtcgtgacaagcaagattttttaaaagaggttgtggaatcctttgccaataagagt
gggcagtctgctttatatgatgctctgttttccagtcagtcctctaaggatagatctttc
cttggtagcgatgagattggaaacatcaatgtgcaagcaccagagcctgatgatttggct
agatatgatgttggtgccgttcgagcacataacggtagtcttcagcaccttacctggctt
ggcttacagtggagttcactgcccaccttacctgcaattcgaaaatggctaaaacagctt
tttcatcatttgccccaggaaacgtcaagacttgaaacaaatgcacctgaatcaatatgt
attttagatcttgaagtatttctacttggagtaatatatacaagccacttacaactagaa
gagagatgtaattcttactacaattcctaccagccgctatgcttagcacttcctgtgtgt
aaacagctttgtacagaaaggcaaaaatcttggtgggatgcagtttgtagtctgattcac
agaaaagtaatacctggaacctcagcaaaacttcgacttctagttcagcatgaaataaac
accctaaggggtcaggagaaacatggccttcaacctgctctgcttatatattgggcaaaa
tgtcttcagaaaacgggcagcgagcttaattctttttatgatcaacgggaatacataggt
agaagtgtttattactggaagaaagtgttaccattattgaagacgatcaaaaagaagacc
agtattcctgaacccattgatcctctgttcaaacattttcatagtgcggacatacaggta
tctgaaattggtgactatgaagaagaagcccacataacatttgctatattggatgcagtt
aatggaaatacggaagatgccatgaccgcttttgaatctataaaaaatgttgtttcctat
tggaatcttgcactgatttttcacaggaaagcagaagacattgaaaatgatgccctttct
cttgaagaacaagaagaatgcaaaaattatttgcgaaagaccagggactacctaataaag
attttagatgatagtgattcaaatccttccgtgattaagaaattacctgtgcctctggag
tctgtaaaggagatgcttaattcagtcatgcaggaactcgaagactatagtgaaggaggt
cttctttataaaaatggttctttgcgaaacgcagattcagaaatgaaacattctacacca
tctcccaccaaatattctccttccccaagtaaaagttataagtattctcccaaaacgcca
cctcgatgggcagaagatcaaaattctttactgaaaatgatctgccaacaagtagaagct
attaagaaagaaatgcaggaattgaaactaaataccagtaactcagcatcctctcatcgt
tggcccacagaaaattatggaccagactcagtgcctgacggatatcagggatcacagagt
tttcatggggctccactaacaattgcaactactggcccttcagtatattatagtcagtca
ccagcatataattcccagtatcttctcagaccagcagctaatgttactcccacaaagggt
ccagtttatggcatgaataggcttccacctcaacagcacatttatgcctgttctcaacag
atgcacacaccaccagtgcaaagctcatctgcttgtatgttctctcaagagatgtatggt
cctccgctgcggtttgagtctcctgcaacaggaattttatcacccaggggtgatgattac
tttaattacagtgttcaacagacaagcacaaatccacctttgccagaaccaggttatttc
acaaaacctccagttgcagctcatgcttcaagatctgcggaatctaaggttatagaattt
ggaaaatctaattttgttcagcccgttccaagtgaaggaataaggcaatctctgacaaca
tcagcacatacaacacagccaactccttttaaatttaactcaaatttcaaatcaaatgat
ggtgacttcacgttttcctcaccacaggttgtgacacagccctcttctacagcttacaat
aacagtgaaagcctcttaggtctcctaacttcagataaacctttgcaaggagatggctat
agtggaccaaaacctgttcctggtcaaaccattggacctcggaatacattcaattttgga
agcaaaaatctgtctggaatttcatttgcagaaaacatggggccaaaccagcataagaat
tctggttttcgccgaagtgatgatatgtttactttccatggtccagggaaatcagtattt
gggacacctgctccagagttagcaaacaagaatcgtgaggcggatggaggaagtgcccat
ggggatgaagatgatgacggcccgcactttgagcctgtggtacctcttcccgataagatt
gaagtaaaaactggggaggaagatgaggaagaattcttttgcaatcgtgcaaaattgttc
cgttttgatacagaatccaaagaatggaaggaacgaggcgttggcaatgtaaaaatatta
aggcataagacatctggtaaacttcgccttctaatgagacgggagcaggtactgaagatc
tgtgcaaatcattacataagcccagacatgaaactgacaccaaatgctggatcagacaga
tcttttgtatggcacgctcttgattatgcagacgagttaccaaaaccagaacaactcgct
attagattcaaaactcccgaggaagcagcactttttaagcgcaagtttgaggaggcccag
agcattttaaaagcctcaggagcaaatgcagccacatcaacaaaccagacaataagaatt
gtaaacgaacccacaagtcgggataacaaggacatttgcaaatctgatgctggaaatttg
aattttgagtttcagcctgcaaagaaagaagggtcttggtggaattgtagtagctgctcg
ctaaagaacgctgcaactgctaagaaatgcgtatcgtgccagaatctaaacccgagtgac
aaagaactccttggcccaccattagttgaaactgttcccactcttaaaactggcctagaa
agtatgcaagatagatttgcgttgacgcctcagaagaaagaaggtcactgggattgtaat
acttgtttagtaagaaatgaacctactgcatccaggtgtattgcatgccagagtacaaag
gtggctagcaaaagtggatcttcgtttgtccagccatcttcctttaaatttggccaggga
gatcttcctaagtctgttagcagcgatttcagatcagtttttccgaccaaggaaggacag
tgggattgcagtggatgcttaggactaaatgaaggaagcgctacaaaatgtgttgcttgt
cagaaaccaagaaaacagagtcagccttacgtttcagcccctgtctcttttaagtttggt
acctcagagacaagcaaggcttcaaagagtggttttgaggacatgtttgctaagaaggaa
ggacagtgggattgcagtgtatgcttggtacgaaatgaagcaaatgctacaaaatgtatt
gcttgtcagaatccaagtaaacagaaccaacctactactgctgttccagtacctgcctct
tcagagacaagcaaggctccaaagagtggatttgagggaatgttcaccaagaaggaagga
cagtgggattgtagtgtttgctctgtacgaaatgagaattcttccttaaaatgcatggcc
tgtgatgcttctaaaccaactcataaaactaccgcagaaactccttcagctttcacgttg
ggtgcaaaaactaagttaagcgacccatctagaagtcaggtcggaacaggatttaaaact
gacttttcagaaaaaggttttaaatttggcagtacagagcaaggttttaaatttggacat
gtggatcaagaaaatacaccttcatttacatttcagagttctaataaggaatctaagtca
acaaaagaagaatttaatttttccatccctgtgtctgctgatggatttaaatttggcatt
caggactcaggaaatcaagagaagaagagtgaaaatgaaaaaccctttgaaagtgacact
ggtttccaggcacaagatgttagtaaccagaagaatggaagtggtttgatttttggtcag
actaatagcacttttacctttgcagatcttgcaaaatcaacttcagaggaaggatttcag
tttggcaaaaaagatcctgatttcaagggattttcaggtgctggagaaaagttattttca
tcacagagtggtaaaatggttgataaagccagcacttccgctgaccttgagaaagatgat
gatgcctataagactgaggacagtgatgacatccattttgaaccagtagttcagatgcct
gaaaaagtggaacttgtaacaggggaagaagatgaaaaagttctttactcacagcgggta
aaattatttagatttgatgctgagataagtcagtggaaagaaaggggcttggggaactta
aaaattctcaaaaatgaagtcaatggcaaactaagaatgctgatgcgaagagaacaagta
ctaaaagtatgtgctaatcattggataaccactacgatgaacctgaagcctctctctggg
tcagacagagcgtggatgtggttagctagtgatttttctgatggtgatgccaaactagag
cagctggcagcaaaatttaaaaccccagaactggctgaagaattcaagcagaaatttgaa
gaatgtcagagacttctactagatataccacttcagactccccataagcttgttgatact
ggccgagctgccaagttaatacaaagagctgaagaaatgaagagtggactgaaagatttc
aaaacatttctgaccaacgatcaaacaaaagtgactgacgaagagagtacaagttcaggt
tcaggtgctgtcagtgcttcagacgcagcaattaagccaaatcccgaaagcactgggcct
gcgttagagtgggataatgatgatttaagagaggatgctttggatgacagtgtaagtagt
agctcagtacatgcttctccactggcaagtagccctgtgagaaaaaatctcttccgcttt
ggcgagtcaacaacaggatttaacttcagtttcaaatctgctttgagtccatctaagtct
cctgccaaattgaatcagagtgggacttcggttggcacggatgaagaatctgatgttact
caggaagaagagagagatggacagtactttgaacctgttgtacctttacctgatctagtc
gaagtatccagtggtgaggaaaatgaacaagttgtttttagtcacagagcaaaactttat
aggtatgataaagatgttggtcagtggaaagaaaggggtattggcgatataaagatttta
cagaattatgataacaagcaggttcgcatagtgatgagaagagaccaagtattaaaactt
tgtgccaatcaccgaataactccagacatggctttgcaagctatgaaagggacagaaaga
gtgtgggtgtggactgcatgtgattttgcagatggagaaagaaaagtggaacatttagct
gtccgttttaaactacaggatgttgcagactcatttaagaaaatttttgatgaagcaaaa
atagcccaagaaaaagattctttgataacaccttatgtttctcgttcagccactcccaga
gagtcaccctgtggcagaattgccgtagctgtactagaagaaaccacaagagagaggaca
gatttaactcagggtgatgatgtagcagatgcagcttcagaagttggagaagtatctagc
acatctgaaactacaacaaaagcagtggtttctcctccaaagtttgtctttggttcagag
tctgttaaaagcatttttagtagtgaaaaatcaaagccgtttgcatttggtaacagttca
gccactgggtctttgtttggatttagttttaatgcacctttgaaaaataacaatagtgaa
actagttcagtagtccagagtggatctgaaagaaaagtggaatctaacaaatgtgaactg
tcaaagaactcaaataccaaagaatcttcagatggcaaagccaaaaatctctttgcttcc
acttcaaaggaagagtcctccactaactacgtatttaaaacaccagaaaaggcaaaagag
gagaaaaaaccagaagatcctccttcagatgatgaaattctcattgtatatgagttaact
ccaacccctgagcagaaagcccttgcagacaaacttaaacttcctgcaactttcttctgc
tataagaataaaccggattatgttagtgaggaagaagaggatgatgaagattttgaaaca
gctgtgaagaaactgaatggaaaactgtatctgggtgactcagaaaaatgtaggacatcg
gaagaaaatcaagcagataatgagaaagaatgtgttattgtttgggaaaagaaaccaaca
cttgaagagaaggcaaaagcagatacattaaagcttccacctacttttttttgtggagta
tgcagtgatactgatgaggacaatggaaatggggaagactttcagtcagagcttcaaaaa
gttcaggaagctcaaaaatcccatggtgaggagctgactgaagtgaccagcacagccgac
agtgtgtgtacagatggaactaaagtgactgttccatttttctataaatccgaagaacct
gattctatgaacaaatctgttagttcagcacctatttcgtctggaactgaggacaaacct
gtagatttgtctactaagaaggaaaatgatgcagattctacaagccaagtggaaagcaaa
acagttccatttgggtttggaagtagcacagggctatcatttgcagacttggcttccagt
acttctggggattttgcgtttggttctaaagataaaaatttccagtgggcaaatactgga
gcagctgtgtttggaacacagtcaaccagtaaagttggtgaagatgaagatggtagtgat
gaagaagtagttcataatgaagatatccattttgaaccaatagtgtcattaccagaggta
gaagtaaaatctggagaagaagatgaagaaattttatttaaagagagagccaaactttat
agatgggatcgagatgtcagtcagtggaaagagcgtggtgttggagatataaagattctg
tggcacacgatgaagaattattatcggatcctaatgagacgagaccaggtctttaaagtg
tgtgcaaaccatgttattaccaaaacaatggaattaaaacccttgaatgtttcaaataat
gctttagtttggactgcctcagattatgctgatggagaagcaaaagtggaacaacttgca
gtgagatttaaaactaaagaaatggctgattgttttaagaaaaaatttgaagaatgtcaa
cagaatttattgaaactccagaaaggacaggtatctcttgcagcagaattatccaaggaa
acaaatcctgtggtgttctttgatgtttgtgcagatgatgagcctctaggacgtataacc
atggaattattttcaaacattgttcctcacactgctgagaacttcagagcactatgcact
ggagagaagggctttggtttcaagaactccattttccacagaataattccagattttatt
tgccaagggggagatatcaccaaacatgatggaacaggagggcggtccatttatggagag
aactttgaagatgagaactttgatgtgaagcatactggccctggtttgttgtcgatggcc
agtcggggccgggataccaacaattcccagtttttcataacactgaagaaagcagaacac
ttggactttaagcatgtagtgtttgggtttgttaaggatggcatggatactgtgaaaaag
attgagtcatttggttctcctaaagggtcagttagtcaaagaattagtatcacagaatgt
ggacagatataa
DBGET
integrated database retrieval system
