Trichechus manatus latirostris (Florida manatee): 101355772
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Entry
101355772 CDS
T05135
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
101355772
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101355772
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101355772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
101355772
NCBI-ProteinID:
XP_004375619
UniProt:
A0A2Y9DJ28
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFNSSL
DVNGTIINRTVSIFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKEMKNRRKKKKQKEQSGEEEKEEGFRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSIRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPIARQRAMSLASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
NIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTVEISKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGDQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKLVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKEDTLIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtacctccaggacctgacagcttccgcttcttcaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggat
ctggacccatactatatcaataagaaaacgtttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaacccaattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctg
accaattgtgtatttatgaccatgagtaaccctccagactggacgaagaatgtggagtac
acatttacaggaatttatacttttgaatcacttataaagatacttgcaaggggcttttgt
ttagaagatttcacatttctgcgggatccttggaattggttggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcttgaagaccattgtgggggcc
ctgatccagtcagtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagt
gtgtttgcgctaataggactacagctgttcatgggcaacctgaggaataaatgtttgcaa
tggcccccagataattctacctttgaaataaacatcacttccttctttaatagttcattg
gatgtgaatggtaccattatcaataggacagtgagcatatttaactgggatgaatatatt
gaggataaaagtcatttttattttttggaagggcaaaacgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaacccc
aactacggctacacaagctttgacacctttagttgggccttcttgtccttatttcgactc
atgactcaagacttctgggaaaacctttatcaactgacactgcgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctacttaataaatttgatc
ctggctgtggtggccatggcgtatgaggaacagaatcaggcaacactcgaagaagctgaa
cagaaagaagctgaatttcagcaaatgctcgaacagttaaaaaagcaacaagaagaagct
caggcagcagcggcagcagcatccgctgaatcaagagacttcagtggtgctggcgggata
ggagttttctcagagagttcttcagtagcatcaaagttgagctccaagagtgaaaaagaa
atgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagagaaggaa
gaggggttccgcaaatctgaatctgaagacagcattagaagaaaaggtttccgtttttcc
ttagaaggaagtagactgacatatgaaaagaggttttcttctccacaccagtctttattg
agcatccgtggctcccttttctccccaagacgcaacagtcgggcaagccttttcagcatc
agaggtcgagcaaaggatatcggctctgagaatgactttgcagatgatgagcacagcacc
tttgaagacaatgacagccgaagagactctctgtttgtgccacacagacatggagagcgg
cgccacagcaatgtcagccaggccagccgcgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagtgctgtggattgcaatggtgtggtctctctggtagggggccct
tctgccctgacatctcccgctggacagctcctgccagagggcactactactgaaacagaa
ataagaaagaggcgatccagttcttaccatgtttccatggatttgttagaagaccccata
gcaaggcaaagagcaatgagtctggccagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccttgctggtataaatttgctaacatgtgtttgatctgg
gactgctgtaaaccatggttaaaggtgaaacacattgtcaacctggttgtgatggaccca
tttgttgacctagccatcaccatctgcattgtcttaaatacgctcttcatggccatggaa
cactatcccatgacggagcagttcagcagtgtattgtctgtcgggaacctggtcttcact
gggatcttcacagcggagatgtttctgaagataattgccatggatccgtattattacttc
caagaaggctggaatatttttgatggttttattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggattgtcagttctccgatcattccgactgctccgagttttcaaa
ttggcaaaatcttggccaactttgaatatgctgataaagatcattggaaattcagtgggg
gctctgggtaacctcaccctggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctcccacgctggcacatgcatgacttcttccactccttcctgattgtgttccgcgtgctg
tgtggagagtggatagagaccatgtgggactgtatggaggtcgctggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctagtggttctgaacctcttcctg
gccttgctcttgagttcgtttagttctgacaatcttgctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagaaaggaatcgattatgttaaaaga
aatatacgtgaatttattcagaaagcttttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaatcataccaccgta
gaaataagcaaagacctcaattatctcaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaaatatgtcgtggatgagagtgattacatgtcatttataaacaatccc
agcctcactgtgactgtaccaattgctgtcggggaatctgactttgaaaacttaaatact
gaagaattcagcagcgaatcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcctgctgagggagaccagcctgaggct
gagcctgaagaatcccttgaacctgaggcctgttttacagaagactgtgtacggaagttc
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacctgagaaaa
acttgctacaagctagtggagcacaattggtttgaaacctttattgtcttcatgattctg
ctcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
acgatgttagaatatgccgacaaagttttcacttatatattcattctggaaatgcttcta
aagtgggttgcatatggttttcaaatgtatttcaccaatgcctggtgctggctagatttc
ctgattgttgatgtttcattggttagcttgacagcaaatgccttgggttactcagaactt
ggtgccatcaaatccctgagaacactacgagctctgcgaccactgagagccttatcccgg
tttgaaggaatgagggttgttgtaaacgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctaatcttttggctaatattcagtatcatgggagtgaatctcttt
gctggcaaattttaccattgtattaactataccactggagagatgtttgatgtaagtgtg
gtcaacaactacagtgaatgtaaagcccttatagagagcaatcaaactgccaggtggaaa
aatgtgaaagtaaactttgataacgtgggacttggatacctttctctgcttcaagtagcc
acttttaagggttggatggatatcatgtatgcagctgttgactcacgaaatgtagaattg
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcattctttactctgaatctcttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaacttggttcaaagaaaccacaaaaacccatccctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaagcaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattctatactggatcaacttggtgtttattgttctattcactggagaatgtgtg
ctgaagctgatctctcttcgctattactatttcaccatcggatggaatatttttgatttt
gtggtagtcattctgtctattgtaggtatgtttctggctgaactgatagaaaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggcaaaggggatccgcacgctgctctttgctttgatgatgtccctccctgcg
ttgtttaacattggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcctatgttaagagggaagttggaatcgatgacatgttcaactttgaaacg
tttggcaacagcatgatctgcctgttccaaattaccacctctgctggctgggatggattg
ttggcacctattcttaatagtggacctccagactgtgaccctgaaaaagaccaccctgga
agctcagttaagggagactgtggtaacccatctgttgggattttcttctttgtcagctac
atcatcatatcattcctggttgtggtgaacatgtacatcgctgtcatcctggagaacttc
agtgttgctactgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtttgggaaaagtttgatcctgatgcgacccagtttatcgagttctccaagctctct
gattttgcagctgccctggatcctcctcttctcatagcaaagccaaacaaagtccagctc
attgccatggatctgcccatggtcagtggtgaccggatccactgcctcgacattttattt
gcctttacaaagcgcgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaagaacgattcatggcatcgaatccctccaaagtgtcttatgagcccattacaaccact
ttgaaacgcaaacaagaggaggtgtctgctatcgttatccagagggcttatagacgctac
ctcttgaagcagaaagttaaaaaggtttcatgtatatataagaaagacaaaggcaaagaa
ggtgatggaacacctatcaaagaagataccctcattgataaactaaatgagaattcaaca
ccagagaaaaccgatgtgacaccttccaccacttctccaccttcgtatgacagtgtgaca
aagccagaaaaagaaaaatttgaaaaagacaaatctgaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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integrated database retrieval system
