Trichechus manatus latirostris (Florida manatee): 101359256
Help
Entry
101359256 CDS
T05135
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04022
cGMP-PKG signaling pathway
tmu04024
cAMP signaling pathway
tmu04740
Olfactory transduction
tmu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101359256
04022 cGMP-PKG signaling pathway
101359256
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101359256
04740 Olfactory transduction
101359256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101359256
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101359256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
101359256
NCBI-ProteinID:
XP_012409618
UniProt:
A0A2Y9FY77
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MLSWVQKVLPQPPETPQKAKMEEQDEADPDMEPELEPEPEPELEPEPEPEAEPEPEPEPE
LEPEQEPEPEAELDQETEPEHEMAPEEAELENEPLPPKEPFVEEEVARAGPRPEETQEAT
PTLLTSLQAQVAVVPEVNSPSSWVLTWLRKGMEKVVPQPVYSSRAAQNATTGSEDPAQAG
ARMLGHCSTGRPEYADGRSEAPRAQDTEPGSWLLRWLEQNLEKVLPQPLKASKGWRDEPA
DVARDPEPPGAPLETEPMLQAPEMPSPPTPSPQEPEEKLASEPQPGLQASSLPPAGGPAR
LVAWLLHRVEKALPQPVLHGKAREQEPDCPVTCDMQTISILPGGPVEPELVLEEVDSHWE
EAEREEGSPSPQGAEAAPACQEEHGVVEQMPRELLWIEEENEDEEEDGEEEEEGQEEEEV
LDVLLDSCLVTEAEEEQSGVGRTQHQKASHQELQEEEVATSSGVPATKEHPEVHVEDADA
DRLPLIVEEKPPSPVSPPPSPAKSDTLTVLGSAVGTHRKKLPSQEDEAEELKVLSPVESP
VVAWSDPPTPQGMDDQDRAASSASQNSAIINNRLQELVKLFKERTEKVKEKLIDPDVTSD
EESPKPSPAKKAPEPAPEVKPADAGQAEEEHYCEMLCCKFKRRPWKKYQFPQSIDPLTNL
MYILWLFFVVMAWNWNCWLIPVRWAFPYQRPDNVHLWLLMDYLCDLIYLLDITLFQLRLQ
FVKGGDIITDKKEMRKNYLKSRRFKMDLLCLLPLDFLYLKFGVNPLFRLPRCLKYMAFFE
FNNRLEAILSKAYVYRVIRTTAYLLYSLHVNSCLYYWASAYQGLGSTHWVYDGVGNSYIR
CYYWAVKTLITIGGLPDPQTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYR
SCMDSTVKYMNFYKIPRSAQNRVKTWYEYTWHSQGMLDESELMVQLPAKMRLDLAIDVNY
DIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPD
GKSVLVVLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLHEILVHYPESQK
LLRKKARRMLRNNKPKEQKSVLILPPRAGTPKLFNAALAAAGKLGAKGAKGGKLAHLRAR
LKELAVLEAAAKQQQLLEQGKSAEDASGEASSASGVQPAAPAEAVPEQPAPPEPAPLDPP
APSSPPPASPGKPDGGAEEAAEPEEHSVRVRISPGPEPSEQILAGEIPEEKKEEE
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtacagaaggtgctccctcagcctccagagacgcctcagaaggccaag
atggaggagcaagatgaggcagatccagatatggagccagagctggagccagagccagag
ccagagctggagccggagccggagccagaagcagaaccggagccagagccggagccggag
ctggagccggagcaagagccagagccagaagcagagctggaccaggagacagagccggag
catgaaatggcccccgaggaggctgagctagagaatgagcccttgccacccaaggagcca
ttcgtggaggaggaagtggccagggctggcccacgccctgaggagactcaggaggccacc
cctaccctgctgacttccctccaagcccaggtcgctgtggttccagaagtaaacagtccc
agcagctgggtgctgacctggctcaggaaaggcatggagaaggtcgtcccgcagcccgtc
tacagcagccgggcagcccagaatgccactactggctcggaggaccctgctcaggctgga
gcacggatgcttgggcactgcagcactgggcgcccagagtatgcagatggacgcagtgag
gcccccagggcccaagacactgagcctgggtcctggctgcttaggtggcttgagcagaat
ctggagaaagtgctgcctcagcccctaaaagcctccaagggctggagagacgagcctgca
gatgttgcccgggacccagagccccccggagcccccttggaaacggagcccatgctgcag
gccccggagatgccttccccgcccacccccagcccccaggaacccgaggagaagctggct
tcagagccccagccaggcctccaggcctcctccctgccgccagctgggggccctgccagg
ctggtggcatggctcctgcacagggtggagaaggcccttccgcagccggtgctccatgga
aaggccagggagcaggagcctgactgccccgtgacgtgcgacatgcagaccatcagcatc
ctccccggagggccagtggagcctgagcttgtccttgaggaggtggactctcactgggag
gaggcggagcgagaggaaggcagccccagcccacagggtgcggaggcggctcctgcttgc
caagaggagcacggggtcgtggagcagatgcccagggagctgctctggattgaagaggag
aatgaagatgaggaagaggatggagaagaagaggaagaggggcaggaggaagaggaagtg
cttgatgtcctgctggatagctgtctggtgacagaggcagaagaggagcagagcggagta
ggtcggacccagcaccagaaggcctcacaccaggagctgcaggaggaggaggtggccacc
agctcaggagtgcctgccacgaaagagcacccagaggtgcacgtggaagacgctgatgca
gacagactcccactcatcgtggaggaaaaaccaccctcgcccgtctcgccgccaccttct
cctgccaaatctgacaccttaacggtcctgggctcagcagtggggacccacaggaagaag
ctgccctcccaagaggatgaggccgaagagctcaaggtgctttctccagtagaatcccct
gtggtcgcctggtcagacccccccaccccacaggggatggatgaccaggaccgcgccgcc
tcctcggccagccagaacagtgcaattatcaacaaccggctccaggagctggtgaagctg
ttcaaggagcggacagagaaggtcaaggagaagctcatcgacccagatgtcacctctgat
gaggagagccccaagccctccccagccaagaaagcccctgagccggccccagaggtgaag
ccggctgacgcagggcaggcagaggaagagcactactgtgaaatgctctgctgcaagttc
aaacgccgcccctggaagaagtaccagtttccccagagcatcgacccgcttacaaacctg
atgtacatcctgtggctgttcttcgtggtgatggcctggaactggaactgctggctgatt
cccgtgcgctgggccttcccctaccagaggccagacaacgtgcatctctggctgctgatg
gattacctgtgcgacctcatttacctcctggacatcaccctgttccagctgcgcctgcag
tttgtcaaaggcggggacatcattacggacaaaaaggagatgcggaagaactacctgaag
tctcgccgcttcaagatggacctgctctgcctcctgcccttggactttctctacctgaaa
ttcggtgtgaaccccctctttcgcttgccccgatgtttaaagtacatggccttctttgag
tttaacaaccgcctggaagccatcctcagcaaagcctacgtttacagggttatcaggacc
acagcgtacctgctctacagtttacacgtgaactcatgtctgtattactgggcttcggcc
taccagggcctcggctccactcactgggtttacgatggcgtgggaaacagttacattcgc
tgttactactgggctgtgaagaccctcattaccattggagggctgcccgacccgcagacg
ctcttcgaaatcgtcttccagctgctgaactacttcacgggtgtcttcgctttctctgtg
atgatcggacagatgagagatgtggtcggagctgccaccgcgggacagacctactaccgt
agctgcatggacagcaccgtcaagtacatgaacttctacaagatccccaggtccgcgcag
aatcgcgtcaagacctggtacgagtacacctggcactcccaaggcatgctggatgagtca
gagctgatggtgcagcttccggccaagatgaggctggacctcgccatcgatgtgaactat
gacatcgtcagcaaagtggccctcttccagggctgtgaccggcagatgatctttgacatg
ctgaagaggcttcgctctgttgtctacctgcccaacgactacgtgtgtaagaagggggag
atcggccgtgagatgtacatcatccaggcgggccaggtgcaggtcttgggcggccctgat
gggaagtctgtgctggtggtgctgaaggctggatccgtgtttggagaaataagcttgctg
gctgttgggggcgggaatcggcgcacggccaacgtggtggcccacgggtttaccaacctc
ttcatcctggataagaaggacctgcatgaaattttggtgcattatcctgagtctcagaag
ttactccggaagaaggccaggcgcatgctgagaaacaacaagcccaaggagcagaagagc
gtgctcatccttccccccagggcgggcacccccaagctcttcaatgctgcgctagctgct
gcaggaaagctgggcgccaagggggcaaaaggcggcaagcttgcccacctcagggctcgg
ctcaaagaactggcggtgctggaggcagcggcaaaacagcaacagttgctggaacagggc
aagagcgcggaagacgcctccggagaggcgagctcggccagcggggtgcagcctgcggcc
ccggctgaggctgttccggagcagcctgcgccccccgagcccgcgcctctggatcccccg
gccccgagctctccaccaccggcctcacccgggaagcccgacggaggcgcggaggaggcg
gccgagcccgaggagcactcggtgcgggtccgcataagccccggcccggagcccagcgag
cagatcctggcgggggagatcccggaggagaagaaggaggaggagtga
DBGET
integrated database retrieval system
