Thauera aminoaromatica: Tmz1t_3345
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Entry
Tmz1t_3345 CDS
T00804
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tmz1t_3345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmz03021
]
Tmz1t_3345
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_3345
Enzymes [BR:
tmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tmz1t_3345
Transcription machinery [BR:
tmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tmz1t_3345
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tmz1t_3345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ACR01940
UniProt:
C4KC59
LinkDB
All DBs
Position
complement(3652921..3657054)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKRAAVLDAPFLLATQIESFAEFLQADTPPDVRRNQGLQAAFTSI
FPISSHSGNARLEYVQYMLGEPAFDVKECQQRGLTFASPLRARVRLVIMDREAPKETIKE
VKEQEVYMGEIPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLRAIGMTPEEILATFHDTDTFHLQGEG
AQFELVPERLRGEVARFDITTPDGKIIVAREKRITSKHIREIDQAGVKTMAVPDDFLLGR
VIATNVVDPATGELLARANDEITEDLLDKLRLAGVTGLSTLYINDLDRGGYISQTLRIDE
TADQWAAKVAIYRMMRPGEPPTEDAVEGLFQGLFYAEERYDLSSVGRMKFNRRAYPEKID
DKAPGWLKRFYQRVGAQGEDGPGVLVNDDILAVVGVLVELRNGRGEIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHRRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYARTNRHGFLETPYRKVNDGKVTDQIDFLSAIEEGQYVIAQANAEIDEAGMLAGDLVS
CRHKGEFLLATSDMVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP
EKPLVGTGIERRVAVDSGTAVQATRGGIVDYVDANRVVIRVNDDETLPGEVGVDIYNMIK
YTRSNQNTNINQRPVVKVGDLIARGDVVADGASTDLGELALGQNMLVGFMPWNGYNFEDS
ILISERVVADDRFTSIHIEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA
EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFT
REGIERDKRAQSIIDEQLRSFKTDLADQMRIVERDAFARIRRMIVGQLANGGPKKLAKGA
ALTDPYLDSLEHYHWFDIRLADETLAVQLEAVREGLENTRKDFEQAFEIKKKKLTQGDEL
PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPLDIVLNPLG
VPSRMNIGQILETHLGWAAKGLGQKIDKMLQAQASALELRGFLEQIYNGSGHPEDIANLG
DSDVRELAGNLKKGVPFATPVFDGAKEEEIQQMLELAGLPTGGQVTLYDGRTGEAFERKV
TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTKVYENIVKGEHKIDSGMPESFNVLVKEIRSLAIDIDLDRE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctacaccgaaaagaaacgtatccgcaagagcttcgccaagcgcgcggcc
gtgctcgatgcgcctttcctgctcgccacccagatcgagtccttcgccgaattcctgcag
gccgacaccccgccggacgtccggcgcaaccaggggctgcaggccgcgttcacctcgatc
ttcccgatctcgagccacagcggcaacgcgcggctcgagtacgtccagtacatgctgggc
gagcccgccttcgacgtgaaggaatgccagcaacgcggcctgaccttcgcctcgccgctg
cgcgcgcgcgtgcgtctggtcatcatggatcgcgaggcgccgaaggagaccatcaaggag
gtcaaggagcaggaggtctacatgggcgagatcccgctcatgaccaccaccggctccttc
gtgatcaacggcaccgagcgcgtcatcgtttcgcagctgcaccgttcgccgggcgtgttc
ttcgagcacgaccgcggcaagacccactcctcgggcaagctgctgttctcggcgcgcatc
attccctaccgcggctcctggctggacttcgagttcgatcccaaggactacctgtatttc
cgcgtcgaccgtcggcgcaagatgccggtcaccatcctgctgcgcgcgatcgggatgacg
ccggaggagatcctcgcgaccttccacgacaccgacaccttccacctgcagggcgagggt
gcgcagttcgagctcgttcccgagcgcctgcgcggcgaagtcgcgcgcttcgacatcacc
acgcccgacggcaagatcatcgtcgcgcgcgagaagcgcatcacctccaagcacatccgc
gagatcgaccaggccggcgtgaagaccatggcggtgccggacgacttcctgctcggccgg
gtgatcgcgaccaacgtcgtcgatccggccaccggcgagctgctggcgcgcgccaacgat
gagatcaccgaggacctgctcgacaagctgcgcctggccggcgtcaccggcctgagcacg
ctgtacatcaacgacctcgatcgcggtggctacatctcgcagacgctgcgcatcgacgag
accgccgaccagtgggcggccaaggttgcgatctaccgcatgatgcgtccgggcgagccg
cccaccgaggatgccgtagaggggcttttccaggggctgttctacgccgaggagcgctac
gacctgtcctcggtcggccgcatgaagttcaatcgccgcgcctaccccgagaagatcgac
gacaaggcgccgggctggctcaagcgcttctaccagcgcgtcggcgcgcagggcgaggac
ggcccgggcgtgctggtcaatgacgacatcctcgcggtggtgggcgtgctggtcgagctg
cgcaatggccgcggcgagatcgacgacatcgaccacctcggcaaccgccgcgtgcgttcg
gtgggcgagctcgccgagaaccagttccgtgcgggcctggtgcgcgtcgagcgcgcggtc
aaggagcgcctgtcgcaggccgagtccgacaacctgatgccgcacgacctgatcaacgcc
aagccgatctcggcggcgatcaaggagttcttcggctccagccagctctcgcagttcatg
gatcagaccaacccgctgtccgagatcacgcacaggcgtcgggtctcggcactgggcccg
ggcggcctgacgcgtgagcgcgccggcttcgaggtgcgcgacgtgcacccgacgcactac
ggccgcgtgtgcccgatcgagaccccggaaggtccgaacatcggcctgatcaactcgctc
gcggtgtatgcgcgcaccaaccgccacggcttcctcgagacgccgtaccgcaaggtcaat
gacggcaaggtcaccgaccagatcgacttcctgtcggcgatcgaggaggggcagtatgtg
atcgcgcaggcgaacgccgagatcgacgaggcgggcatgctcgccggcgacctggtgtcg
tgccgccacaagggcgagttcctgctcgccacctcggacatggtgcagtacatggacgtg
gccccgggccagatcgtgtcggtcgcggcttcgctgattcccttcctggagcacgacgac
gccaaccgcgcgctgatgggcgccaacatgcagcgccaggcggtgccctgcctgcgcccg
gaaaagcccctggtcggcaccggcatcgagcgccgcgtggcggtcgactcgggcactgcg
gtgcaggccacccgtggcggcatcgtggactacgtggatgcgaaccgggtggtgatccgg
gtgaacgacgacgagaccctgccgggtgaagtcggcgtcgacatctacaacatgatcaag
tacacccgttccaaccagaacaccaacatcaaccagcgcccggtggtgaaggtgggcgac
ctgatcgcccgcggcgacgtggtggccgacggcgcttccaccgacctcggcgagctcgcg
ctcggccagaacatgctggtcggcttcatgccctggaacggctacaacttcgaggactcg
atcctcatctccgagcgcgttgtcgccgacgaccgcttcacctcgatccacatcgaggaa
ctcaccgtcgtcgcccgcgacaccaagctcggacccgaggagatcacccgcgacatcgcc
tcgctcggcgaggctcagctgtcgcgcctggacgagtcgggcatcgtgtatatcggtgcc
gaggtcgaggccggcgacgtgctggtcggcaaggtcacgcccaagggcgagacccagctc
acccccgaggaaaagctgctgcgcgcgatcttcggcgagaaggcctccgacgtgaaggac
acctcgctgcgcgtgccctcgggcatggtcggcaccgtcatcgacgtgcaggtgttcacc
cgggagggcatcgagcgcgacaagcgcgcgcagtcgatcatcgacgagcagctgcgcagc
ttcaagaccgacctcgccgaccagatgcgcatcgtcgagcgcgacgccttcgcgcgtatc
cgccgcatgatcgtgggccagcttgccaacggtggtccgaagaagctcgccaagggtgcg
gcgctcaccgatccctacctcgacagcctggagcactaccactggttcgacatccgcctc
gccgacgagaccctcgcggtgcagctcgaggccgtgcgggaaggtctggagaacacccgc
aaggacttcgagcaggccttcgagatcaagaagaagaagctcacccagggcgacgagctc
cccccgggcgtgcagaagatggtcaaggtgtatctggcggtgaagcgccgcctgcagccg
ggcgacaagatggccggccgtcacggcaacaagggcgtggtttccaagatcgtcccggtc
gaggacatgccgtacatggaagacggcaccccgctcgacatcgtgctcaacccgctcggc
gtgccgtcgcggatgaacatcggccagatcctcgagacccacctcggctgggcagcgaag
ggactcggtcagaagatcgacaagatgctgcaggcgcaggcctcggcgctggagctgcgc
ggcttcctcgagcagatctacaacggcagcggccaccccgaggacatcgccaacctcggc
gactccgacgttcgcgagctcgcgggcaacctcaagaagggcgtgcccttcgcgaccccg
gtgttcgacggtgccaaggaagaggaaatccagcagatgctcgagctggccggcctgccc
accggcggccaggtcaccctctacgacggccgcaccggcgaggccttcgagcgcaaggtc
accgtgggctacaagcatgtgctgaagctgcaccacctggtcgacgacaagatgcacgcg
cgttcgaccggcccgtactcgctcgtcacacagcaaccgctgggcggcaaggcgcagttc
ggcggccagcgcttcggcgagatggaagtgtgggcgctggaagcctacggcgccgcctac
acgctgcaggagatgctgacggtcaagtccgacgacgtgaccggccggaccaaggtgtac
gaaaacatcgtcaagggcgagcacaagatcgattccggcatgccggaatccttcaacgtg
ctggtgaaggaaatccgttcgctggcgatcgacatcgacctcgaccgcgagtga
DBGET
integrated database retrieval system
