Thermotoga neapolitana: CTN_0215
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Entry
CTN_0215 CDS
T00847
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tna
Thermotoga neapolitana
Pathway
tna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTN_0215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tna03021
]
CTN_0215
03400 DNA repair and recombination proteins [BR:
tna03400
]
CTN_0215
Enzymes [BR:
tna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTN_0215
Transcription machinery [BR:
tna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTN_0215
DNA repair and recombination proteins [BR:
tna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTN_0215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ACM22391
UniProt:
B9KBJ5
LinkDB
All DBs
Position
complement(206633..210436)
Genome browser
AA seq
1267 aa
AA seq
DB search
MRGEKMKEISCGRRTRVSFGKTHEPLPVPDLVEIQKSSYQKFLEKGLLEVLKKFSPIYSQ
STRSDLKRSDKGFALEFVSTRVGDPTVDPLECKAKGLTYSVPVYATARLTDLKSGEMKEE
EVFLGYIPYMTERGTFIINGAERVVVNQIVVSPGLYFSSEYIDREEYGGYFLPSRGAWLE
VILDPYDGVLYAGLDGKKVNLFLFLKTIGYEKDEDILSLYPTFLDADDEDSLLLHVGSII
LEDIYDGDRKIAEKWDILTKDLAERILMSSNIEQIKIVHPIAQNTFEKMLEILSTGEESE
TEEERTKVYGLNEVTVVDAYLEIFRRLRPEELPRINAAKRYLHDLFFNSERYDLSEVGRY
KVNERLKNAYIRYLIEVEGEDPEEARKKTYSETATILKPLDIVLASRILFDYFERRYIND
FEIDSYELKSLIRIFKEEYLSKRKTAPYDLRKLITTFRRNYDVTSDIGVFAAIRYVSNIN
KELPSIPFDTKDHLGNKRVRSVGELVQREFERLFARAQKAIQERLTLISSLSKVSIQSLI
NIKSIISTVNQFFAMNQLSQFMDQVNPLSELTHKRRVSAVGPGGLRRESKVFEARNVHYS
QYGRLCPIETPEGANIGFITSLAIYAKVDEYGFLMTPYRKVVNGKVTDEIVYLRANEEEE
YKIVPATTPVDEEGNIIPERVVARMGEDIRLVPREEVDLMDVSTKQPFSVSASLIPFLEH
DDASRALMGSNMQRQAVPLLKTEAPLVGTGMEWEAAKNSGYVVLARHNGIVKEVDASKIV
IHRTDENGNPMYDENGNPVLDEYRLLKFVRSNQDTTINQKPIVNEGDFVKEGDPIADGPA
TDMGELALGRNILVAFMPWEGYNYEDAILVSQELLEEDVFTSVHIEVYETQARETRLGPE
EITADIPNVSKELLKNLDENGIIRVGAYVVSDYGVGSQAILVGKVTPKGEGDTTPEEKII
RSVFGERGRDVKDTSLRLPHGVEGRVIRVDVYDQNDIADLGSGVLKLVRVYVATRKTLDI
GDKLAGRHGNKGVVSNILPKEDMPFLPDGTPVQMVLNPLGIPSRMNVGQILETHLGWLAK
LTGKWFATPVFEGAKEDEILKPLYEERKKRGLHLGDDENNPTGKVILRDGRTGEPFDNPV
VVGYMYMLKLVHIAKEKIHARSTGPYSLIHQQPLGGKSHFGGQRLGEMEVWALEAYGAAH
TLAEMLTIKSDDIKGRNETYKAILKNMNIPEPGVPESFRVLIKELRGLALDVRLYDENGN
EIDIDKY
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgagaaaatgaaagagatttcctgtggtaggagaacgagggtttccttcggc
aaaactcatgaacccctaccagtacctgaccttgtggaaattcagaaaagctcctaccag
aagtttcttgaaaaaggccttctcgaagtcctcaaaaagttttcccccatttactcacaa
tcgacccgttcagatttgaaaagatccgacaaaggattcgccctcgaattcgtctccaca
agagtgggagatcctaccgttgatcccctggagtgcaaggccaagggtttgacctacagt
gttcccgtgtacgcaaccgcacggctcacagacctgaaaagcggtgaaatgaaggaagaa
gaagtgttcctggggtacattccctacatgacggaaagaggtaccttcataataaacggt
gctgaaagggtcgttgtcaatcaaatagtggtctctccaggtctgtacttctcctctgaa
tacatagacagagaagagtacggtggatacttcctcccctcccgaggagcatggctcgag
gttatcctcgatccgtacgatggtgttctctacgctggtttggatgggaaaaaggtcaat
ctctttctgtttctgaagaccataggatacgaaaaagacgaggatattctctcactctat
cccacattcctggatgcagacgatgaggatagtctccttttacacgttggttctatcatc
ctcgaagacatctacgacggtgacagaaaaatagcggaaaagtgggatatcctcaccaaa
gatctggcagaaagaattctgatgtcgtccaacatagagcagatcaagattgttcatcca
atcgctcagaacactttcgagaaaatgcttgagattctttccaccggcgaggaaagtgaa
accgaggaggaaagaactaaggtttacggcttgaatgaggtaacggttgtggatgcctac
cttgagatcttcagaagactgaggccagaagaactcccaaggatcaacgctgcgaagaga
tatttgcacgacctgtttttcaattcggaaaggtacgatctttcggaagtgggaaggtac
aaagtgaacgaaaggctgaagaacgcttacataaggtacctgatagaagtcgaaggtgaa
gatccagaagaagccaggaagaaaacctacagcgaaacagccaccattctgaagcctctc
gacattgttcttgcctcaagaatactcttcgattacttcgaaagaagatacataaacgac
tttgaaatagattcctacgagttgaagagtctgataaggatattcaaagaggaatatctt
tcaaaaaggaaaactgcgccgtacgatctgagaaagctcatcaccacattcagaagaaac
tacgatgtcacctcagacataggtgtttttgcggccattagatacgtttccaacataaac
aaggaacttccatcgatccccttcgacacgaaggatcatctcggaaacaagcgagtcaga
tcggtgggagaacttgtacagagggagtttgaaagactctttgctcgagcgcaaaaggcc
atacaggaacgactcactctgataagttctctgagtaaggtctccatacagagtttgata
aacatcaagtccatcatttcaacggttaaccagtttttcgccatgaatcagctctcccag
ttcatggaccaggtgaacccactctcagaactcacccacaagagaagggtatcagcggtc
ggtccgggtggtctgagaagagaatcgaaagtcttcgaagcaagaaacgttcactactca
cagtatggaaggttgtgtcccattgaaacccctgaaggtgcgaacataggattcatcaca
tcacttgcgatatatgccaaagtggacgaatacggtttcttgatgacaccttacagaaaa
gtggtcaacggtaaggtgacagacgagatcgtctatctgagagcgaacgaggaggaagag
tacaagatcgttcccgctacaacccctgtggatgaagaaggtaacatcattcctgaaaga
gttgtggcgcgtatgggtgaagacatcagactcgttcccagagaagaagtggaccttatg
gacgtttccacgaagcaaccgttcagcgtttccgcttctctcatacccttcctcgaacac
gatgatgccagcagggctctcatgggttccaacatgcagaggcaggccgttcctcttttg
aaaacggaagccccactcgttggaacgggtatggaatgggaagcggcgaagaactctggt
tatgttgttctggcacggcacaacgggatcgtaaaagaagtggatgcgtccaaaatcgtc
attcatcgaaccgacgaaaacgggaatcccatgtacgatgaaaatggaaatcccgttctg
gacgagtacaggttgctgaagtttgtgaggtccaaccaggatacaaccataaaccagaag
cccattgtgaacgagggagacttcgtcaaagagggtgatccaatagccgatggtcctgca
acggacatgggtgaacttgctcttggaaggaacatactcgttgcgttcatgccatgggaa
ggctacaactacgaggacgccattctggtcagtcaggaactcctcgaagaggatgtcttc
acatccgttcacatagaggtctacgaaacacaggccagagaaacgaggttgggacctgag
gagatcaccgcggacattccgaacgtgagcaaagaactcctcaagaatctcgacgagaac
ggaatcataagggtgggagcttacgttgtgagtgactacggagtgggttctcaggccatt
ctcgttgggaaggtaactcccaagggagaaggagacaccaccccggaggagaagatcatc
agatcggtcttcggagagagaggtcgagacgtcaaagatacttccctgaggcttccgcac
ggtgttgaaggaagagtcataagggtggatgtgtacgatcagaacgatatagcggacctg
ggatccggtgttttgaaactggtcagggtttacgtggcaaccaggaaaacactggacata
ggagacaaactggcgggacgtcacggaaacaagggagttgtttccaacattcttccaaag
gaagacatgccgttcctgcccgatggaacaccggttcagatggttctgaatccgcttggt
attccatcccgtatgaacgttggtcagatcctcgaaacacaccttggatggctcgcaaaa
ttgacgggcaagtggttcgcaacacccgttttcgaaggtgcaaaagaagatgaaattctg
aaaccactgtacgaagaaaggaagaagagaggactccaccttggagacgacgaaaacaac
ccgactggaaaggtgattctcagggacggaagaacgggagagcccttcgacaatcccgtg
gtggtcggttacatgtacatgttgaagctcgttcacatagccaaagagaagatacacgca
agatccacaggaccctactctctgattcaccagcaacccctcggaggaaaatcccacttc
ggtggtcaaagacttggagagatggaggtctgggctctggaggcgtacggagcagcacac
acccttgcggagatgctgacaataaagtccgatgatatcaagggcagaaacgaaacctac
aaggccatactcaaaaacatgaacataccagaaccgggtgttcctgaaagtttcagggtt
ctcatcaaagagctcagagggcttgcccttgatgtgaggctctacgatgagaatggtaac
gagatagatatcgataagtactga
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integrated database retrieval system
