Pyrobaculum neutrophilum: Tneu_1818
Help
Entry
Tneu_1818 CDS
T00682
Name
(GenBank) eRF1 domain 2 protein
KO
K03265
peptide chain release factor subunit 1
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tneu_1818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tne03019
]
Tneu_1818
03012 Translation factors [BR:
tne03012
]
Tneu_1818
Messenger RNA biogenesis [BR:
tne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Tneu_1818
Translation factors [BR:
tne03012
]
Eukaryotic type
Release factors
Tneu_1818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
baeRF_family10
eRF1_3
eRF1_1
acVLRF1
Ribosomal_L7Ae
DUF6841
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ACB40735
UniProt:
B1YB35
LinkDB
All DBs
Position
1596003..1597160
Genome browser
AA seq
385 aa
AA seq
DB search
MSFNRPPNGVYYIKTPVEMRAFINLLKKFRGYATTLITLYINSERPIPDVLNLLRSEWST
ASNIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVVPPQ
PIYTFKYICDTAFHTEILEDQMHAGVVYGIVVVERGEAVIALLKGGQWEVVKTVEFFVPS
KHHAGGQSANRFKRQTEHLAETFYKVLAEEVNKIFLQIPTLKGIIVGGPGPTKEDFLEEG
GLDYRLKDKVLAVVPACCANEYGVVEAIKNAQEQLKESEYVHAKEVMEKVMYYAVRKSDY
MVYGKERALKALEMGMAETIVVAEELGEDAVLEVVMKAEEKGVKVEVVPKGVEESKTLMQ
AFGGYVALLSTPVWVLEQQIQAEAA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaacaggccgcctaacggcgtctactacatcaagacgcccgtggagatgagg
gcgtttatcaacctgctgaagaagttcaggggctacgcaactaccttgatcaccctctac
ataaactcggagaggcctatccccgacgtgttgaacctgctgaggtctgagtggtccacc
gcctccaacatcaaggacaagaccaccaggacccacgtccaggacacactggagcgtata
ataaacaaccttaagggcgaggcgaaggctcccgagaacgggatggccgtcttcgccggg
ttccacatgataaaccagggcaactacgagtgggtttactacgtcgttgtgcctccccag
cccatatacaccttcaagtacatatgcgacaccgccttccacaccgagatactggaggat
cagatgcacgccggcgttgtatacggcatcgtcgtcgtcgagaggggggaggccgtcatc
gcgctactgaaggggggacagtgggaggtggtgaagaccgtggagttcttcgtgccgagt
aaacaccacgccggcggccagtcggcgaaccgcttcaagcggcagactgagcatctggcg
gagaccttctacaaggtgctggcggaggaggtaaacaagatcttcctccagataccgacg
ctgaagggcatcatagtggggggtccgggccccaccaaggaggacttcctagaggagggg
ggtctcgactacaggcttaaggataaggtcttggcggtggtgccggcctgttgcgccaac
gaatacggggttgtggaggcgataaaaaacgcccaggagcagctcaaggagagcgagtac
gtccacgccaaggaggtcatggagaaggtgatgtactacgcggtgaggaagagcgactac
atggtatacggaaaggagagggcgctcaaggccctggagatggggatggccgagaccata
gtcgtggccgaggagctcggcgaagacgccgtacttgaggtggtgatgaaggccgaggag
aagggggtcaaggtggaggtcgtcccaaagggcgtcgaggagtctaaaacgctgatgcag
gccttcggcggatacgtcgcgctcctctccaccccagtgtgggtgctggagcaacagatc
caggcagaggccgcttaa
DBGET
integrated database retrieval system
