Tetraodon nigroviridis (spotted green pufferfish): GSTEN00003479G001
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Entry
GSTEN00003479G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12042
troponin C, skeletal muscle
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04020
Calcium signaling pathway
tng04814
Motor proteins
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
GSTEN00003479G001
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
GSTEN00003479G001
04820 Cytoskeleton in muscle cells
GSTEN00003479G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tng04812
]
GSTEN00003479G001
Cytoskeleton proteins [BR:
tng04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
GSTEN00003479G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_FSTL1
EF-hand_9
EH
AIF-1
SPARC_Ca_bdg
SPEF2_C
Motif
Other DBs
NCBI-ProteinID:
CAF89544
UniProt:
Q4TC38
LinkDB
All DBs
Position
undetermined
AA seq
205 aa
AA seq
DB search
TDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAIIE
EVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFIDREEFGEILR
LTGEPVTEEDIDEMFGESDTNKDAKIDFDXXXXXXXXXXXXXXXXXXXXXXXXEEEIDEL
MKHGHKNADGMLDFDEFLKMMENVQ
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
acggatgcccaaagcgacgctcgctccttcctgacggaggagatgattgcagagttcaaa
gccgccttcgacatgttcgacaccgacggtggtggtgacatcagcaccaaggagctgggc
accgtgatgaggatgctgggccagaacccatccagggaggagctggacgccatcattgag
gaggtcgatgaggacggcagcggcaccatcgactttgaggagttcctggtcatgatggtg
cagcagttaaaggaggaccaggctggaaagagcgaagaagaactttccgagtgcttccgc
atctttgacaagaatggagacggattcattgacagggaggagtttggggagatcctgcgt
ctcactggggagcccgtgactgaggaggacatcgatgagatgtttggggagtcagacaca
aacaaagacgcaaagattgacttcgatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagaggaagagattgacgagctg
atgaaacacggacacaaaaacgctgatggcatgttggactttgacgagtttctcaagatg
atggagaacgtgcagtaa
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