Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011456G001
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Entry
GSTEN00011456G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00011456G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
GSTEN00011456G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
PBV_CP
Motif
Other DBs
NCBI-ProteinID:
CAF94986
UniProt:
Q4SWJ6
LinkDB
All DBs
Position
9
AA seq
1320 aa
AA seq
DB search
LCLLWRNGGIWKDEGGREAKRKRAAVWVPPRRGPASSVKGYSVWTLTQTAEERKGKRAKN
SLVRSPTDLFVSLNKQGGSSVGRGLSSGDWLHQSHSAPFSSENGAQGGDSDAWQCTPPQS
TSPSGETPAHPPPSQPGSRPRSRPASQSPSPPSALTGTKKRSNKPAHMRRNIRKLLREHQ
LEAVTQVAQQDELERRRRLDQQRLQDFPTPALTDYKIGDVAKHASASTTRQDVQSASPEV
ICLNISSSSEEKEGKTSPASSAARQHKTDVIHLSSSEDDSVVSSKPTKAGESEPRGAHTD
DAFNHPDAQGRVLVNLNHPSEEEDIFLLPQLARAVKPHQIGGIRFLYDNLIESVERFGNS
SGFGCILAHSMGLGKTLQVISFIDVLFRHTQAHTVLAIVPVSPRLSCGDEWSSLSHTKLG
IKYRSEDSVMSVISSQVNTLQNWLSEFNMWVPAPEALRPDTAAGPITPRTFKVHILNDEH
KNTASRAKVVEEWARDGGVLLMGYEMYRLLSLKKSYVAGRKKSKKAMGPVVIDVDEEDRQ
QELLKGIEEALARPGPDVVICDEGHRIKNCHASTSQALKNIKTRRRVVLTGYPLQNNLIE
YWCMVDFVRPDFLGKRQEFSNMFERPILNGQCVDSTPEDIRLMRYRSHVLHSLLEGFVQR
RGHDVLKDQLPPKQEHVLLVRLSPLQRALYTEFMNGFREPRNTGWLSLNPLKAFCVCCKI
WNHPDVLFEALQKENLANDQDLDLEDITTAGPTRSPTAPNQKSKPLKNPFSMGELSLNQL
QEKANQVITYEWAKEIMSDYNPSILENSAKMVLLFHLIEESVRKGDKLLVFSQSLSTLTV
IENFLVKRPVPPSPQKDKPNQNWVRNVNYYRLDGSTTASERERLINQFNDPSNTSVWVFL
LSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKK
IYDRQISKQGMSDRVVDDQNPVLTFTKREVESLLHFVEEEPDPSQVHLQPQDGLESVLRK
ALHLYPHLITKQPFLHESLLIDCKELKLSHDEQKAAKRGYEQEKRASVPYTRPSYAHYYP
ASDQSLTNIPAFSQRNWRPPPHVQKKPADGVQPVQSTPVPMLPRQASSGSAPRDSSSGSG
LAGFPVNCLQKAGVFVQKIVVTTDLEIPGTNSSTDVQARITAGQSIHIIRGTKGTNSSVF
EFLCDVCSRIVIFDYFLFVFLGTYIRTSDGRIFAVRAANKPKTGEENAASSPAKTSQAPA
EESTNVGNSCLSAERKQQPPSDILPRPLSPDSPEIISELQRYTGGAEGSGEETQNGAPSA
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
ctctgtctgttgtggaggaacgggggtatttggaaggacgaggggggtagggaagcaaag
cgcaagcgcgcggccgtttgggtcccccctcggaggggccccgcctccagcgtgaagggt
tatagtgtctggacgctgactcagacagctgaggagcggaagggaaaaagagctaaaaac
agcctggtcaggagtccgaccgacctgtttgtcagtctgaacaaacaaggaggctcgtct
gtgggccgagggctcagctctggggactggttacaccagtcacacagcgcccccttcagc
tcagaaaatggggctcagggaggcgactcggacgcgtggcagtgtacccctccccaatct
acctcgccatcgggggagactccggcccacccgccgccctcccagccgggatccagaccc
cgttccaggccagcaagccaaagcccctcccctccttcagccctaaccgggaccaagaag
aggagcaacaaaccagcgcacatgcgacgcaacatcaggaagctgctgagggaacaccag
ttggaggcagtgacccaggtggcccagcaggatgagctagagaggcggcggcgtctggac
cagcaaaggctgcaggattttcccacgccagcgctgactgattacaaaattggtgatgtg
gcgaagcacgcgtctgcatcaaccacgcggcaggacgtccagtcggccagcccggaagtg
atctgcctgaacatcagcagcagcagtgaggagaaggagggcaagacgagcccagcttcc
tctgctgccagacagcacaaaacagatgtgatccacctgagctccagcgaggacgattct
gtcgtcagcagcaagcccaccaaggcaggagagagcgagccgcggggcgcgcacaccgac
gacgccttcaaccacccagacgcccagggcagggtgctggtcaacttgaaccatccgtcc
gaggaggaggacattttcctgttgcctcagctggccagagctgtcaagcctcaccagatc
ggcgggattcgtttcctgtacgacaacctgatcgagtcggtggagcgcttcggcaacagc
agcggcttcggctgcatcctggcccacagcatgggccttggcaagacgctgcaggtcatc
tccttcatcgacgtcctcttccgacacacgcaggctcacaccgtgctcgccattgtacct
gtaagcccccgtctcagctgcggtgacgaatggtccagcctttctcatacaaaactagga
atcaagtatagatcagaagattcagtcatgtctgtaatttcatcccaggtcaacactttg
caaaattggctgtcggagttcaacatgtgggtcccggcccctgaggcgttacggccagac
acggctgcgggtccgatcacaccccgcaccttcaaagtccacatcctcaatgatgagcac
aagaacactgcgagcagggccaaggtggtggaggagtgggcgagggacggaggggtgctg
ctgatgggctatgagatgtatcgtctgctgtcgctgaagaagagctatgtggccggcagg
aagaagagcaagaaagcgatggggcccgtggtcatcgacgtggatgaagaggacaggcag
caggagctgctcaaaggcattgaggaagccttggccaggcccggtccagatgtggtgatt
tgtgacgaaggccatcgtatcaagaactgtcacgccagcacgtcgcaggctctgaagaac
atcaaaaccaggcgccgcgtggtcctgacgggctatccactccagaacaacctgatcgag
tactggtgcatggtggactttgtccgaccggactttctcggcaaacggcaggagttcagt
aacatgtttgaaaggcccattttgaacgggcagtgtgtggacagcactcctgaggacatt
cggctgatgaggtacaggagccacgttcttcacagcctgctggagggctttgtgcaaaga
cgaggtcatgatgttctgaaggaccagctgccccccaagcaggagcatgtgctcctggtg
cgactctctcccctgcagcgggcgctctacaccgaatttatgaacggctttagagagcca
aggaacaccggctggctcagcctcaaccctctgaaggctttctgcgtctgctgtaagatt
tggaatcatccagacgtgctgttcgaagccttgcagaaggagaacctggcgaacgaccag
gatttagaccttgaagacatcaccaccgcaggtcccacccggtctcccacggcacccaat
caaaagtctaaacccctgaagaatccattttccatgggggagctgagtctcaaccagctg
caggagaaagcgaaccaggtcatcacttatgaatgggcaaaggaaatcatgtctgactac
aaccccagcatcctggagaactctgcgaaaatggtgctgctctttcatctgatagaagag
agcgtcaggaagggagacaagctcctcgtcttcagccagagtttgtccacactgacggtg
attgagaattttctcgtcaagaggcctgttcctccatcaccccaaaaggacaaacccaac
cagaactgggtccgaaatgtcaactactaccgactggacgggagcacaacagcttctgaa
agggagagactaattaatcagttcaacgatccatccaacacctcagtatgggtcttcctc
ctgtcaaccagggctggctgtttgggtgtaaacctgattggagcaaaccgggtggtggtt
ttcgatgcatcctggaacccttgtcacgatgcccaggctgtgtgccgtgtctaccgctac
ggtcagaggaagccttgccatatctaccggctggtgtgtgacttcaccctggagaagaag
atctatgaccggcaaatctccaaacagggcatgtctgaccgggtggtggacgaccagaac
ccggtgttgaccttcaccaagagggaagtggagtctcttcttcactttgtggaggaggag
ccagacccctcccaggtccacctgcaaccccaggatggcctggagagtgttctcaggaag
gcgctgcatctttaccctcacctcatcactaagcaacctttcctccacgagtccctgctg
atagactgcaaagaactgaagctgagccacgatgagcagaaggcagccaagaggggctat
gagcaggagaagagggcctctgtgccatacacgcgtccttcctatgctcactactaccct
gccagtgaccagagcctcaccaacatccccgccttcagtcagaggaactggcgccctcct
cctcacgtgcaaaagaagccggcggacggcgtccaacctgtgcagtctactccagttcca
atgctgccacgccaggcgtcctcaggctccgcccccagagacagttcatctggctccggc
ctcgcaggttttcctgtcaactgcctgcaaaaagccggagtgtttgtgcagaagatcgtc
gtcaccactgacctggagataccaggcaccaacagctccacagatgtccaggccagaatc
accgctggacagagcatccatatcatccgagggaccaaaggtacaaactcctctgtcttt
gaatttctttgtgatgtttgttcgcgtatagttatctttgattatttcctctttgtgttc
ttagggacatacatcaggacatctgatggtcgcatttttgctgtcagggcagctaataaa
cccaaaactggagaggaaaatgctgcatcttccccagccaaaacctcccaggctccagcg
gaggagtccaccaatgttggcaacagctgtctgtcagctgaaaggaagcagcagccaccc
tctgacattttgccccgcccactttcccccgacagtccagagatcatcagcgagttgcag
cgctacacggggggcgcggaaggttccggggaggaaacccaaaacggcgcgccttccgcc
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