Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016782G001
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Entry
GSTEN00016782G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
GSTEN00016782G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00016782G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
GSTEN00016782G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
DUF3915
Motif
Other DBs
NCBI-ProteinID:
CAF98897
UniProt:
Q4SKD5
LinkDB
All DBs
Position
13
AA seq
624 aa
AA seq
DB search
KDRPASSASQTSTVINERLQELVRMFKERTEKAKEKLIDPDSSDEDSPSPPQGSAPAPRA
ENAPSGGGGGGAESLTDEGPSGSRRAKALGWFRACLNYRFPASIDPFTNLMYVLWMMLVC
LAWNWNVWFIPVRWAFPYQTPENIYYWLLTDYLCDFIYILDITVFQPRLQFVCGGDIVCD
KKEMRKNYMRTKRFKLDVASLVPLELFYFKTGINPLLRLPRLLKINSFFEFNERLEAILT
KAYIYRVIRTTTYLLYCLHCNACLYYWGSAFTGLGSTSWSLQRRGQQLINYFVGVFAFSI
MMGQVRQKVEPRFVLLFGSPSNRSPAPPHRCVTWWARPRRARPTTAPAWTTPSNTCPPTA
SPRTSRTESKPGTTTPGSRRACWVSRAPPPARTCPRALGRDADSRLADEQELLTQLPDKM
RLDIAIDVNYSIVSKVPLFQGCERQMIFDMLKSLRSVVYLPGDYVCRKGEVGREMYIIKA
GEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNE
ILVHYPDSKKLLRKKASPPSPSPCLLRLPPPATPRRRRPPWPAPHLFAPLPVAATTTLWP
LLLVLSDHPGRVAALRGGLRSSHP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
aaggatcgtccggcctcctcagccagccagaccagtaccgtgataaacgaacgcctccaa
gagctcgtccgcatgttcaaggagagaaccgagaaggccaaagagaagctcatcgacccc
gacagctcagatgaagacagcccgtctcctcctcagggttcagctccggcgcccagagct
gagaacgcaccgtcgggaggaggaggaggaggagcggagagcctgacggacgaggggccg
tccgggagccgcagggccaaggcgcttgggtggttccgggcctgtttgaactaccgcttc
cccgccagcatcgacccgttcaccaacctgatgtacgtgctgtggatgatgttggtttgc
ctggcgtggaactggaacgtgtggttcatcccggtccgctgggcctttccctaccagacg
ccggaaaatatctactactggctgctgaccgactacctgtgcgacttcatttacatcctg
gacatcaccgtcttccagccgcggctgcagtttgtctgtgggggagacatcgtgtgtgat
aaaaaagaaatgaggaagaattacatgcgaacgaaacgcttcaaattggacgttgccagc
ctggttcctctggagctcttctatttcaagacgggcatcaaccctctgcttcgcttgccc
aggctgctgaagatcaactccttctttgagttcaacgaacgcctggaggccattttgacc
aaagcctacatctacagggtgatccgcaccaccacttacctcctttactgcctccactgc
aacgcctgcttgtactactggggctccgctttcaccggactggggtccaccagttggagt
ctacaacggcgagggcaacagctcatcaactactttgttggcgtgttcgccttctccatc
atgatgggacaggtgcgccaaaaagtggagcctcggtttgttcttctttttggttcccca
tcaaaccgttctcccgctcccccccacagatgcgtgacgtggtgggcgcggccacggcgg
gccagacccactaccgcacctgcatggacaacaccatcaaatacatgtcctcctaccgca
tccccaaggacgtccagaaccgagtcaaaacctggtacaactacacctggcagtcgcagg
gcctgctgggtaagccgagccccgcctcccgcgcgcacgtgcccgcgtgcgctcgggaga
gacgctgattcccgccttgcagatgagcaggagctgctgacgcagctgcccgataaaatg
cgcctggacatcgccatcgacgtcaactactccatcgtcagcaaagttccgctttttcag
ggttgtgagaggcagatgatcttcgacatgctgaagagtttgcgctccgtcgtctacctg
ccgggggattacgtctgcaggaagggcgaagttggccgggagatgtatatcataaaagcc
ggggaggtgcaggtggtgggaggacccgatggaaagacggtgttcgtcactctcagagcg
ggatcggtctttggagagatcagtctgctggcggtgggtggaggcaacaggcgcacggcc
aatgtcatcgcgcacgggttcgcgaatctcttcatcctggacaaaaaagacctgaacgag
atcctggttcactaccccgactccaagaaactcctccgcaagaaggccagccctccatct
ccctctccctgcctcctccgtctcccacctccagcgacgccgagacgccgtcgcccacct
tggccagctccacaccttttcgctccgcttccggttgccgcaacaacgacgctctggccc
ctcctcctggttctcagtgaccatcccggaagggttgcagctctcagaggagggttgaga
tcttctcatccgtga
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