KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018742G001
Entry
GSTEN00018742G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00018742G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tng03041]
    GSTEN00018742G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00018742G001
Spliceosome [BR:tng03041]
 Complex B
  Other components
   Prp19 complex
    GSTEN00018742G001
 Complex C
   Prp19-CDC5 complex
    GSTEN00018742G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    GSTEN00018742G001
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-ProteinID: CAG00328
UniProt: Q4SGA4
LinkDB
Position
17
AA seq 825 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKDQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGQTKQHKETTRKEVGDDPRKLKPGEIDPNPE
TKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRA
AGINVRKKRKKKRGVDYNAEIPFEKKPALGFYDTSMEQFEHLEPNFKRLRQQHLDGELRS
EQEERERKRDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAPQISDAELEEVVKL
GLASEVARQAAEESESGNSASSALLSEYSVTNTVTGLRTPRTPAAQDRILQEAQNLMALT
NIDTPLKGGLNTPLHESDFSGVTPQKQQIQTPNTVLSTPFRTPGPGQGQESMTPQVGGAL
TPRAAATPGLTPGRTPLRDKLNINPEEQLTDPAYAKHTQKESLQQLRQGLLSLPAPKNDF
EIVLPENAEKELEEMETDSGFTEDASDVDARKQAQRDAEREKELKLRHMSVQRDLPRPTE
VNESVLRPASMEPLSDLQLAEELIKQEMITMLHHDCLHHPTNNAASQLQRGKNRGPTSTS
NNASHITYLEAHPYKQFSSEEMEQAKGILAAEMEVVKAGMGHGDLSMDAYSQVWEECYGQ
VLYLPAQNRYTRANLASKKDRIESFEKKLEVNRAHMTAEARKAAKLEKKLKILLGGFQSR
ALGLVKQHNELWEQVEQAATELQTFSQLKKQEDVAIPRRQEVNLMHEYSNAPPSLPQPII
CFCSFVHAMLGPTGGCGEANGARERTAAAIRRAADGERGTGQQRA
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgatcaaaggaggcgtctggcggaacactgaggatgagatcctcaag
gcagcagtgatgaaatatgggaaagaccagtggtctcgtattgcttctctgctgcaccgc
aaatctgccaaacagtgtaaagcaagatggtacgagtggttggatcccagtataaagaag
acagaatggtcgagagaagaggaggaaaagcttctccatttggccaagctgatgcccact
cagtggaggaccattgctcccatcataggacagacaaagcagcacaaagagacgacgagg
aaggaagtcggagatgaccccagaaagttaaaaccaggagagatcgacccgaatcccgaa
accaaacctgccagacctgatccagtggacatggacgaagatgagttggagatgctgtct
gaagccagggctcgactggctaacacccagggcaagaaagctaagaggaaggccagagag
aaacagctagaggaagccaggcgattagcagctctacaaaagcgtagagagttgagggca
gcaggaattaacgttcgtaagaagagaaagaagaagagaggagtcgactacaatgctgaa
atcccctttgagaagaaacctgctctgggtttctacgacaccagcatggagcagtttgaa
catttggagcccaatttcaaacgactgagacagcagcacttggatggagaactgcgcagt
gagcaagaagagagggagagaaagagagataaacaaaaaataaagaaaaagaaggaaagc
gatcttccctcagccatcctgcagaccagtggagtggctgagttcaccaagaaacgctcc
aaattggtcttaccagcaccacagatcagtgatgctgagcttgaagaagttgtgaagttg
ggccttgccagtgaggttgcccgacaagctgctgaagagagcgagagcggtaattcggct
tcctctgcccttctgtcagagtacagtgttactaacaccgtcacagggctgcgtactccg
cgcacacctgccgctcaggacaggattcttcaggaagcccagaacctaatggcactgacc
aacatcgatactcctctgaagggaggcctgaatactccgttgcatgagagtgatttcagt
ggagtgactcctcagaagcagcagattcaaacacccaacactgttctcagtaccccattc
aggacccctggaccaggtcaaggacaggaaagcatgacccctcaagttggtggggcattg
accccacgtgcagctgcgaccccgggtttgaccccaggccgcacgcccctgagagacaaa
ctgaacattaaccccgaggagcaactgactgatcctgcgtatgctaaacacacgcaaaag
gagagtttgcagcagctgaggcagggtctgctgtcgcttccagcccccaagaacgatttt
gagattgttcttcctgaaaatgcggagaaagagctggaagaaatggagacggacagtggg
tttacagaggacgcatcggatgtggacgcacgcaagcaggcgcaacgggacgcagaaaga
gagaaagagctgaagttgcggcacatgtctgttcaaagagatctacccagacccactgag
gttaacgagtctgtcctgcgacccgcctccatggagccgctgtcagacctccagctggca
gaagagctgatcaagcaggaaatgatcaccatgctgcaccacgactgtctgcaccacccg
accaataatgcagccagtcagctgcagcgcggcaaaaacagaggccccacctccacgtcc
aacaacgcctcgcatataacttacctggaagcacacccctataaacagtttagctcagag
gagatggagcaggcaaaggggatcctcgcagcagaaatggaagtggttaaggctggaatg
gggcatggcgatctcagcatggatgcttacagccaggtgtgggaggaatgctatggacag
gttttgtatctgccagcacagaacaggtacaccagagctaacttggcttccaaaaaagac
cgcatcgaaagctttgagaaaaaacttgaggtgaacagggctcacatgaccgcagaggcc
cggaaagcagcaaaactggagaagaagttaaaaatcctgctgggaggcttccagtccaga
gctctcgggctggttaagcagcacaatgagctatgggaacaggtggagcaggctgccacg
gagctccagaccttcagtcagctaaagaagcaggaggatgtggcgattcccaggagacaa
gaggtaaatctgatgcacgaatattcaaatgcgccaccttcactgccacaaccaatcatt
tgcttctgttcattcgtccacgccatgttaggccctacgggaggatgtggagaggcaaat
ggagcgagagaaagaactgcagcagcgatacggagagctgctgatggagagagaggcact
ggtcagcaacgcgcctaa

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