KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022212G001
Entry
GSTEN00022212G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:tng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tng04121]
    GSTEN00022212G001
Ubiquitin system [BR:tng04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     GSTEN00022212G001
SSDB
Motif
Pfam: Bromodomain WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_Nup120_160 BBS2_Mid Shisa_N Auxin_resp Beta-prop_SPT8
Other DBs
NCBI-ProteinID: CAG02962
UniProt: Q4S8S0
LinkDB
Position
7
AA seq 1416 aa
SELYYLIARFLQSGPCKKAAQILIEELEEYELVPERWSWDGKKYKQTFQDWVIVNEHIPA
DYLLRVCQRIGPLIEKEVPPSVPGVQTLLGLGKQSLLRTSKSKYFLSHLHSLGFNINSIS
TYRLTCFCDLGCIHKVCSGSSIAALHRGRPPEPPVINGGPPNVVSTMAARQATGTARFSQ
VLPSSSYQHMKIHKRILGHLSSVYCVVFDRTGRRIFTGSDDCLVKIWATDDGRFLATLRG
HSAEICDMAVNYENTLIASASCDKTIRVWCCGPVHLSVCCRPTLPPSHPFSDQPVKFVER
SRPGVQVSTSSFSSGGMFMATGSTDHMIRVYYLGAETPMKVAEMDAHTDKVVVVQFSNSS
DSLRFVSGSRDGTAKIWRYQQQEWKAISLDMAAKLPGNTVANGDDKTKLVVTMVAWDRAD
TSVITAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVMEAHPFDSRILLSAGHDGNIYMWDL
TKGAKIRNFFNMVTQHRGQIEGQGHGAIFDCKFSIDGQHFACTDSHGHLLIFGFGCSKPF
EKRMDAGIRGKCNWEILNPHLSFCLLGDGELVEQVLGQQTAENRESLLDNLIRQLQNEQD
ERHIAARQAEEAAAAAAEEGEAEVEVVVAPSAAPRRSGQVDGVWQMQHNTLRSQVATERD
LLAWSRRVMVYEVPHGVYRVSEECRRAKGDLECSFYNAERRKKPVPCTPKNEPLTTRLRS
LRPNKTKRQRHAYQTRSAQVRRRGTRSRNSRNRLNSGSRMDSDSDGEADEQVEQSEASSD
GEAQWQSESSSSDSSSDYSDWTADAGINLQPPKRSSRRPAQPQGYSSSEEEEGDNKTKEA
KKNEEKKKKSKETKQRPTSSLGELNPEEWLPPSWIMETVPRCSPFVPQMGDELIYFKQGH
QAYARAVRRAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSG
KMTNESFSLKYHDMPDVIDFLVLQQFYNEAKEHNWQPGMRFRSIIDDAWWFGLVEDQEPL
QPEYPDSLFQCFAVKWDNGECEKMSPWDMEPIPEEAALPEQVGDGVEVAEEEMKALLYRP
QEGEWGAHTRDEECERVICGIEQLFTLEVAKAFASPVNLQDYPLYCAVVAYPTDLSTIRK
RLENRFYRRISALMWEVRYIEHNARTFNEPQSPIVATAKVVTDVLLRYIGDQSCTDILDL
YHKLKADISSGEEAKVSVSLLPPASAYLFSNVPKNTHLSNQNSNKRGAALEVKAWRGRCR
ELLRRMVASPDSQPFRQPVDLFEYPDYRDIIDTPMDLGTVSETLYEGNYENPMEFAKDIR
LIFSNSKAYTPNKKSQIYAMTLSLSAFFEKSIISIISDYKSAIQNERRTRQRLSYRDRLQ
NGGSSPPVSPSPSSEKQQRSRGRGCPTVLSKFRDEQ
NT seq 4251 nt   +upstreamnt  +downstreamnt
tcagaactgtattacctcatcgccaggtttctgcagtcgggaccttgtaagaaagcagca
cagattctgattgaggaactggaggagtacgagttggtacctgaacgatggagttgggat
ggaaagaaatacaaacagacctttcaagattgggtgatcgtgaacgagcacattcctgca
gactacctgctccgtgtttgccagcgtatcggtccactcatagaaaaggaggtcccacct
agtgttcctggagtccaaacacttttaggacttgggaaacagtcactcctgcgcaccagc
aaaagcaagtattttttatcacatctacatagtttaggttttaacattaacagcatatca
acctatcggctaacatgtttctgcgacttaggctgtatacacaaagtgtgcagtggctca
tccatcgctgcactccatcgtgggcgtccacccgaacccccagtcattaatggaggcccc
cctaatgttgtgtccacaatggctgcccggcaggctacaggcacagctcgttttagccag
gtcctgccatcgtcttcctaccagcacatgaagatacataagcgcattcttggccacctc
tcttcagtgtactgtgtagtctttgaccgcaccggtcggcgaatatttacgggttctgat
gactgtctggtgaaaatctgggccacagatgacggtcgctttttggcaacactccgtggc
cattctgcagagatctgtgacatggctgtcaactacgagaacactctcattgcttcagcg
agctgtgacaagaccatccgagtgtggtgctgcggacctgtgcacctatcagtgtgctgc
aggcccacgctgcctccatcacatccattcagtgatcagccggtgaagtttgttgagagg
tcccggccaggagttcaggtgtccacgtcgtctttcagcagtggtggaatgttcatggct
actggcagcactgatcacatgatcagggtctattacctcggtgccgaaacaccgatgaag
gttgctgagatggacgctcatacggataaagttgtggttgttcagtttagcaatagtagt
gacagcctgcggtttgtgagtggcagtcgtgatggcacagcaaagatctggcgttaccag
cagcaggagtggaaggccatttcattagatatggctgccaaactccctgggaatactgtt
gccaacggtgatgataagaccaaactggtggtgactatggtagcttgggaccgtgctgat
acctctgtcattactgcggtgtcaaattacctgctcaaagtgtggagctcaaccactggg
cagctgctgcacgtgttatccggtcacgatgacgaggtgtttgtcatggaggctcaccca
ttcgactcccgcatcctgttgtctgctggccatgatgggaacatctacatgtgggacttg
accaaaggagcaaagattcgtaacttcttcaatatggtaacccagcaccgagggcagatt
gaagggcaaggccacggtgctatttttgactgcaagttctcaattgatgggcagcatttt
gcatgtaccgactcacacggacatctgctcatctttggctttggctgcagcaaaccattt
gaaaagagaatggatgcagggatcagaggtaaatgtaactgggagattttgaacccacat
ttgtctttttgcttgttaggtgatggggagttggttgagcaggtacttgggcagcaaaca
gctgaaaacagagagagtttgttggacaacctcatcagacagttgcagaacgagcaggat
gagcgtcacatcgcagcacggcaggcggaagaggcggcggcagcagcagcagaggagggg
gaggcagaggtggaggtggtcgtggctccgtccgctgctcctcgcaggagcgggcaggtg
gacggtgtgtggcagatgcagcataatactctgcgcagtcaagtagctacagagagagac
ctgctggcctggagccgcagagtcatggtctacgaggtgccgcacggcgtatacagagtt
tcagaggagtgcagacgagccaagggcgacctagagtgttctttttacaacgcagagagg
aggaagaagccagtcccctgcacacccaagaatgaaccacttaccacacgcctacgctcc
ctacgacccaacaagacaaaacgccagcgccatgcctatcagactcgctcagctcaagtc
cgccgccgtggaaccagaagtcggaattcaaggaatcgcctgaactcggggagccgcatg
gactccgacagtgacggagaggcagatgaacaggtggagcaaagtgaggcctcttctgat
ggagaagctcagtggcagagtgaaagtagctcaagtgactcatccagcgattattccgat
tggacagctgatgctgggatcaacctccaaccaccaaaaaggtcgagcaggaggcctgca
cagcctcaaggctacagcagctccgaggaggaagagggtgacaacaagacaaaggaggcc
aagaaaaatgaagagaagaagaaaaagtccaaagagaccaagcagagaccaacttcatct
ctgggtgagcttaatccagaggaatggcttcccccgtcctggataatggaaacggttccg
cgttgttccccgtttgtcccacaaatgggtgacgagctcatctacttcaaacaaggccat
caggcttacgcccgggctgtccgcagggccaaagcttacagtattaaccctcagaaacaa
ccctggaacagactcaacctcagggaccaggaatctgtaaaggtggttggaatcaaatat
gaggttggaccaccgacgctgtgctgccttaaactggctttcttggatccagtctcaggg
aagatgactaatgagtctttctcattaaagtatcatgacatgcccgatgtcattgatttt
ctggtgctgcagcagttctacaatgaagcgaaagagcacaactggcagccaggcatgcgc
ttccgcagcatcattgacgatgcctggtggttcgggctggtggaggaccaggagcctttg
cagccagagtatcctgacagcctgttccagtgttttgcagtgaagtgggataatggtgag
tgtgagaaaatgagtccctgggacatggagcctattcctgaagaagctgcattgccagaa
caggttggtgatggtgtggaggttgcggaggaagagatgaaggctcttctttacaggccc
caggagggagaatggggggcacacacacgagacgaagaatgtgagagagtcatctgtggc
atcgagcagctttttacactggaggtggccaaggcatttgcgtcaccagtaaacctgcag
gactacccgttgtactgcgctgtggtggcgtaccccactgacctcagcaccatccgcaag
cgactggagaaccgcttctacagacggatctcagcgttgatgtgggaggtgcgctacatc
gaacacaacgcacgcactttcaacgaacctcagagccccattgtagcaactgccaaagtg
gtgaccgacgttctcctgcgttatataggggaccagagctgcacagacatcttggatctg
taccacaaactgaaggctgatatcagcagcggagaagaagccaaggtgagtgtttcatta
ctcccccctgcctctgcttatcttttttcaaatgttccaaaaaatacccacttgtctaat
cagaattccaacaagcgcggtgcggctttggaagtgaaggcatggcgaggtcggtgccga
gagctgctgcgtcgaatggtggcctcaccagactcgcagccattcaggcagccagtggat
ctcttcgaatatccagattacagagacatcattgacacgcccatggatctgggcacggtg
tcggagaccttgtacgaaggcaattacgaaaacccaatggagtttgccaaagacattcgc
ctcattttcagcaactccaaggcgtacacaccgaacaagaagtcccagatctatgccatg
accctcagcttgtcggccttcttcgaaaaaagcatcatctccatcatctcggactacaag
tcggccattcagaacgagcggcgcacgcgtcagagactcagctacagggacagattacag
aatggaggcagctcaccgcctgttagtccctcccccagctcagaaaagcagcagcgcagc
agaggaagaggatgtccaaccgtcctctccaagttcagggacgagcagtga

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