Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022621G001
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Entry
GSTEN00022621G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00022621G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00022621G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
GSTEN00022621G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2417
Motif
Other DBs
NCBI-ProteinID:
CAG03278
UniProt:
Q4S7V4
LinkDB
All DBs
Position
18
AA seq
558 aa
AA seq
DB search
NAEERLVNYLLSPERYNKLIRPAVNKSQQVAISIQVSLSQLISVNEREQIMTTNLWLFQE
WNDYRLRWDPEKYDGIKKLRIPSKHLWLPDIVLYNNADGVYEVSVYCNAVVSSTGDIFWL
PPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTEVDLILTSDFASRDDFTPSGEWDIV
SLPARKNEDPNDETYLDITYDFVIQRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKI
MLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMVLVTFSIVSTVSVLNVHHRSP
STHHMPDWVKRIFLIRLPTFLLMRHPGSSDVRSKLRTKYAKQLGVGKSCTPTVAEKKHYS
NIRLGGIPSDADSFYAEDTPRSLCWKVGDLPDGFSDHQRPLGTHSEMEEAVEGVKYIAEH
MKTEDDNEGIIEDWKYVAMVIDRLFLWIFILAASVRKPRWDNNRKRQREQMLGRGVRMDA
PKGSCALLGEGRAKSCSDQKLEIKAPDEVNQIMETNLWLRHIWNDYKLRWIPTEFDGIEF
IRVPSNKIWRPDIVLYNK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
aacgccgaagagcggctggtgaactacttgctgagtccggagcgttacaacaaactgatc
aggccggctgtcaacaagagccagcaggtggccatctccatccaggtgtctctgtctcag
ctcatcagtgtcaatgaaagagaacagatcatgaccaccaacctgtggcttttccaggag
tggaacgactacaggctgagatgggacccggaaaagtacgatggcatcaaaaaactgcgt
ataccctccaaacacctctggctcccggatatagtgctctacaacaacgctgacggcgtc
tacgaggtttccgtctactgcaacgccgtggtctccagcacaggagacatcttctggctc
cctccggccatctacaagtcggcgtgtgccatcgaggtgcagaacttccccttcgaccag
cagaactgcacgctcaagttccgctcctggacctacgaccacacggaagtggatttaatc
ctcaccagcgacttcgccagccgggacgatttcacgccgagcggtgagtgggacattgtc
tcgctcccagcgcgcaaaaacgaggaccccaacgacgaaacctacttggatatcacctac
gactttgtcatccagaggaagccgctgttttacaccattaacctgatcatcccgtgcgtg
ctaatcacgtcgctagccatcctggtgttctacctgccgtcggactgcggggagaagatc
atgctgtgtatctcggtcctcctggctctcactgtcttcctgctgctgatatcgaagatc
gtgccccccacctctcttgcagtgccactcataggcaaatacctgatgttcaccatggtc
cttgtcaccttctccatcgtgagcaccgtctctgtcctcaatgtgcaccaccgctccccg
tccacacatcacatgcccgactgggtcaaacgcatcttcctgatccgcctgcccaccttc
ctgctcatgaggcacccgggttcttccgacgtccgcagcaagctccgcacaaagtacgcc
aagcagctcggtgtcgggaagagctgcactccaaccgtcgccgagaagaaacactactcc
aatatcaggctggggggcatcccgagcgacgcggactccttctacgccgaggacacgccg
cgtagtctctgctggaaagttggtgacttaccagatggcttttccgaccaccaaagaccc
ctgggtacccactcggagatggaggaggctgtggagggcgttaagtacattgctgagcac
atgaaaacagaggatgacaatgaagggatcatagaagattggaagtacgtcgccatggtg
atagaccgtctcttcctgtggatcttcatcctggctgcctcggtgagaaaaccgcgatgg
gacaacaacaggaaaagacaacgagagcaaatgctggggaggggagtccgtatggatgcg
ccaaaggggagctgtgcgctcttaggggagggacgtgccaagtcatgttcggatcagaaa
ctggaaattaaggcaccggatgaagtgaaccagatcatggaaacaaatttatggctcaga
cacatttggaatgactacaaactgagatggattccgacagagtttgacgggattgagttc
atcagagttccctcaaacaagatctggagacctgacatcgtgctctacaacaagtga
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