Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026088G001
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Entry
GSTEN00026088G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00026088G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00026088G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-ProteinID:
CAG05909
UniProt:
Q4S0C3
LinkDB
All DBs
Position
2
AA seq
881 aa
AA seq
DB search
MGVWNVALVVLCVELSLFVTTLCTTTRYVTYEEDKLGTEIGNLSRDLKIDPADDPDTSFR
LMQENNSSVIQMREVDGLLSVADVIDREQLCPRSLRCLITFDIVVRAKEKFQLIHVEIEV
KDINDHPPRFPHNETHLEIVENVPLGSRFPLEIALDQDVGENYIQSYNISPSSHFEVEVR
DQEDGLKFAELVLVRELDREVEDSYTIKVTATDGGVHARSGSMLVNIKVLDSNDNSPSFE
HSSLTVELDEDSPVGHRVLRVHAFDPDEGVNGEVTYALAAGFSPEVGRLFHVDPYTGEVT
LKGLVDFERRRLYELVIKASDMGANSVPSTCKVHIDVVDVNDNAPEISIKPMTPGSDGVA
SITEAAAADSFVALISTSDRDSGSNGYVRVSLLGHEHFSLQQAYGDSFMIITTTALDRER
IPEYNLTVVAEDLGNPPFKTVRQYTVRVKDENDNPPLFSKTLYEVSVLENNIPGSYVTTV
VARDPDVGENAKVSYKVLDAEVPGGSPVSTYVSVDSHSGSLYTLRSFDYETLQQIDLVIQ
AEDRGSPSLSSTSTIRIKVVDQNDNYPYFTFPVLQNDSADVPLPFNAPAGYLALRVSAED
EDEGMNKVLSFQIFQGDTNLFRVDKDSGEIVLKQWLSAEIGDVLEIKISVSDNGRSPLSS
SATIRFLVSDTEPSADQVFLVLPSSHREGLSWDGSFIVIIILSGGCALLLVAIVAVVVTC
KFGRRARRDGSKRDACRSLFDSRPLPMLGSAESNIYTGPRGFFPERTPSSLDDSCLYEER
SADSEAKMFLPSKHFQRTSAWQSDKYCLQVSGTGNTDQLSVKDSGKGDSDFNDSDSDISG
DGGKKNFLTFQPRQRKFLAHLPLFCHLRLINEAQLISKFSF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggagtttggaacgtcgctctggttgtgttgtgcgtggaactgtctttatttgtcacc
actctgtgcacaaccaccaggtatgtcacctatgaggaggacaagctgggcactgagatt
ggcaacctgtccagagatttaaagatcgatccagctgatgacccagacacgtcattccgc
ctcatgcaggagaacaactcgtctgtgatccagatgcgggaggtggatggactcctgagc
gtggctgacgtgattgaccgggagcagctgtgccccaggtccctgcgctgcctcatcacc
ttcgacatagtggtgcgcgccaaagaaaagttccagctgattcacgtggagatcgaggtg
aaggacatcaatgaccaccctccgaggttcccccacaacgagacgcacttggagatagtg
gagaacgtcccgctgggatcaaggttccccctggagattgctctggatcaggatgtaggt
gagaactacatccagagctacaacatctccccttccagccattttgaggtggaagtgcgc
gatcaggaggacgggctgaagtttgcagagctggttctggtgagggagctggacagggag
gtggaggattcctacacgatcaaagtcaccgcgacagacgggggcgtgcacgccaggtcc
gggtcaatgctggtcaacatcaaagttctggattccaacgacaacagcccctcgtttgaa
cacagctctttgacggtggagctggatgaggattccccggtgggacacagagttctgaga
gtgcatgccttcgacccggatgaaggcgttaacggcgaggtgacgtacgcgctcgccgcg
ggcttctcgccagaagtcgggcgtcttttccacgttgatccttacaccggagaagtgacc
ctgaaggggctggttgattttgagagaagaagattgtacgagctcgtcattaaagcgtct
gacatgggcgccaactcggttccttctacgtgcaaagttcacatagacgtggtggacgtg
aacgacaacgcgcctgaaattagcatcaagcccatgacccccggcagtgatggggtcgcc
tccatcaccgaggctgcggctgcagacagctttgtggctttaatcagcacttcggacaga
gactctggctccaacgggtacgtgcgcgtcagcctgctcggacacgagcatttctctctc
cagcaggcgtatggagactctttcatgattataaccacaaccgctttagacagagaaaga
attcctgagtacaacctcaccgtggtggcagaagacctgggaaacccacctttcaagacg
gtccgccagtacacggtccgtgtgaaagacgaaaatgacaaccctcccctcttcagtaag
acgctttatgaagtttcagtcctggaaaataacattccaggttcttatgtgacgacagtt
gttgctcgggatccagatgtgggagaaaacgccaaagtttcctacaaagtcctagatgct
gaggtgccaggagggtctcctgtgtccacgtacgtctctgtggattcccattcaggctct
ctgtacactctgagatcctttgactatgagactctgcagcagattgacctggtcatccag
gctgaagacagaggctccccctccctctccagcacatcaacaatcaggattaaagttgtg
gaccagaatgacaactatccttacttcaccttccccgtccttcagaacgactctgcagac
gtccctctgccattcaacgccccggctggctatttggcccttcgcgtctctgctgaagac
gaggatgaaggcatgaacaaggtgctctcattccagattttccaaggggacaccaacctt
ttcagggtggacaaagactcgggcgagatcgtcctcaaacagtggctgtcggctgagatc
ggagatgtgctggaaatcaagatctccgtgagcgacaacggcaggtctccgctgtccagc
agcgccaccatccgcttcctggtctcagacacggagccctccgctgaccaagtgttcctc
gtcctgccatcaagccacagggagggtctcagctgggacggctccttcatcgtcatcatt
attctcagcgggggctgtgcactgttgctggtcgccatcgtggccgtggttgtcacgtgc
aaattcggacgccgggcgagaagggatgggtcaaagagggacgcctgccgcagcctgttt
gacagcaggcccctgcccatgctcggctcggcagaatccaacatctacacgggcccgcgg
ggcttcttccccgagaggacgccctcatctctcgatgattcctgcctgtacgaggagagg
agcgctgactcggaggctaagatgttcctgccctccaagcatttccaaagaacatctgca
tggcaaagtgataaatactgcttgcaagtgagtggcactggaaacactgaccagctgagc
gtgaaggacagcggcaaaggggacagcgacttcaacgacagtgactccgacatcagcggg
gatggaggcaagaagaactttttgactttccaacctagacaacgtaagtttctggctcat
ctcccacttttttgtcatcttagactcataaatgaagcacaattaatctccaaattttct
ttctga
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