Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026186G001
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Entry
GSTEN00026186G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08131
collagen type IX alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00026186G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00026186G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00026186G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tng00535
]
GSTEN00026186G001
Proteoglycans [BR:
tng00535
]
Extracellular matrix (ECM) proteoglycans
Others
GSTEN00026186G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
CAG05980
UniProt:
Q4S052
LinkDB
All DBs
Position
21
AA seq
825 aa
AA seq
DB search
GDSVCPPLRSGQDDLPGFDLITQFQLDVIPLKGVRKVDGSTSLQVAYRLDREANFQIPTM
LNFPRGFPDEYSFMVTFRMIKNTVNKVWNVWQIMDEEGNKQAGLRLNGDQQALEYFLIDA
DGNLQTVTFPGLSVLFNTRWHKVMIGVERNQVTLYVDCQPVDMRPIRGKGPINTEGDTLI
GRLDTDPDASVVFELQWMLIHCDPKRAQRESCNELPATEVKEHGLRSAQHPLRCASADTL
ARKSSSRAPWAPRTRRSQRVCRRKWQRWERWSSWSSWQSRYPWQQGGGRRARSSWAKRPG
WSSRTSWLIWSNGPQRTCRRERSSWLSWPSRSSCKLNVNVLRATSMCVKLKKALTRVTFR
RAQPPKDLLYVFQLILGPPGKPGIPGDEGNIGPEGPPGPRGTAGIAGPPGPPGPPGPVCP
AACPAGPQGLPGIPGMKGHKGLAGEPDQDGKPGEKGQRGPVGFPGSAGEKGDRGAVGPQG
EQGPKGDKGDVGEPGADGLHGIPGADGAKGEPGADGPTGPVGLPGKAGEPGKPGEDGKPG
DKGATGERGDKGDTGAKGMKGHTGLKGDQVSTTVQLCNPKKNIFVLTGTSWSSWNQRRGE
KGNRGSTGETGQPGQPGHEGLAGPAGARGLEGEPGPPGSPGPRGLPVWQTPFSTLVLNDT
AQSPVSRTLLLHYLTGPKTAIGAPGTPGPAGLPGPPGAAGEAGAAGPPGPAGPKGHPGFF
GIPGAPGQKGDPGVKGDKGDNGENGVGIKGSAGAPGAPGAPGTPGVGKDGQKGERGETGV
PGIPGASGPRGPSGPPGLCDPSTCLSRIPPVYMFGGKKSASYKNP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
ggcgactctgtctgcccacccttgagaagtggacaagacgaccttcccggctttgatctg
ataacccagttccagctggacgtgatccccctgaaaggcgtgcggaaagtggacggttcc
acctccctccaggtggcgtaccgcctggacagagaggccaacttccagattccaaccatg
ttaaactttcctcgtggatttcctgatgagtactccttcatggtgactttccgcatgatc
aaaaacacagtgaacaaggtgtggaacgtctggcaaatcatggacgaggagggcaacaag
caagccgggctgaggctgaacggcgaccagcaggccctggagtacttcctgattgacgcc
gacggcaacttgcagacggtcactttcccgggcctttccgtgctcttcaacaccaggtgg
cacaaggtgatgatcggagtggagcgcaaccaagtcaccctttacgtggactgccagccc
gttgacatgaggcccatcagaggcaaaggccccatcaacacggagggagacaccctgatt
ggcaggctggacactgaccctgacgcctctgtcgtgttcgagctacagtggatgttgatc
cactgcgacccaaaaagagcccagagagaaagctgcaacgagctgcccgccaccgaggta
aaggaacatgggctcaggtctgcacagcatccgctgcggtgcgcttcggctgacactttg
gccagaaaaagcagttcaagggccccctgggccccccggaccagaaggtcccagagggtc
tgcaggagaaaatggcagagatgggagagatggtcttcctggtcctcctggcagtccagg
tatccctggcagcaagggggaggcaggagagctcggtcttcctgggcaaagaggcctggc
tggtcttccaggacctcctggctcatctggtccaatgggccccagaggacctgtaggaga
gagaggtcttcctggctttcctggccctccaggtcctcctgtaagttgaacgttaatgtt
cttagagcaacatccatgtgtgtaaaattaaaaaaagcactcacacgtgtcactttccgc
agggcccagcctccgaaggacctgctgtatgtgtttcagctcattctgggaccaccaggg
aaaccaggaatcccaggggatgaaggaaacatcggcccagagggtccacctggacccaga
ggaacagctggaatcgcaggtcctcctggtcctcctggtccccccgggcctgtgtgtcct
gctgcctgccctgcaggcccacaggggttgcctgggatacctggaatgaagggacacaaa
ggtctggctggtgagcctgaccaggacgggaagcctggagagaagggacaaagagggccc
gttggattccctggaagtgcaggagaaaaaggagacagaggagctgttgggcctcaggga
gaacaaggtccaaaaggagacaaaggagatgttggagaacctggtgcagacggtttgcat
ggaattcctggtgctgatggggccaagggtgaaccaggggcagatggacctactgggcca
gttggacttccaggaaaagcaggcgaacctggaaaacctggagaagatgggaaacctgga
gacaagggagcaacgggtgaaaggggcgataaaggtgacacaggcgccaagggaatgaag
ggccacactgggctgaaaggtgatcaggtatctacaacggtgcagctctgcaaccccaaa
aaaaacatttttgtgcttacagggacctcctggagttcctggaatcaaaggagaggagag
aaaggcaacaggggatcaactggagaaaccggacaaccaggccagccgggacacgagggt
ttggctggtccagctggagcgcgaggtctagagggagaaccagggcctccaggatccccg
ggccccagaggacttcctgtatggcagactccattctccactctggtcctaaatgacacg
gctcagtctcctgtatcaaggactcttctcctccattaccttacagggcccaaaacggca
attggagcccctggtactcctggaccagccggacttcccggcccccctggagcagctgga
gaggccggtgcagcaggacctcctggaccagcgggtcccaaaggccacccaggtttcttt
ggaattcctggtgcacctggtcaaaaaggtgatcctggagtgaaaggtgacaaaggagac
aacggcgagaacggagtgggaattaaaggaagcgcaggagcaccaggtgcaccaggtgca
ccgggcactcctggcgttggcaaggacggccaaaaaggagaacgtggggagacaggagtt
cctggcatccctggagcatctggtccgaggggaccctcaggcccacctggactctgtgac
ccatccacctgtttaagcagaatccctcctgtttacatgtttggaggaaagaagtctgca
agctacaaaaatccctga
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