Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026565G001
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Entry
GSTEN00026565G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00026565G001
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00026565G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00026565G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00026565G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00026565G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00026565G001
Spliceosome [BR:
tng03041
]
Complex B
Other components
Prp19 complex
GSTEN00026565G001
Complex C
Prp19-CDC5 complex
GSTEN00026565G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
U-box type E3
GSTEN00026565G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
GSTEN00026565G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
PROPPIN
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_DCAF12
U-box
Beta-prop_WDR35_TULP_N
eIF2A
Tricorn_2nd
Cytochrom_D1
B-prop_COPA_B_2nd
Ge1_WD40
Prp19
Motif
Other DBs
NCBI-ProteinID:
CAG06271
UniProt:
Q4RZB1
LinkDB
All DBs
Position
1
AA seq
405 aa
AA seq
DB search
VCNEVPEHPCVSPVSNQVFERRLIEKYIAENGTDPMNGQPLSEEQLVDIKFSHPIRPKAP
SATSIPAILKSLQDEWLQDKATILTTERKKRGKTVPEDLVRAEDLGKYHQVASHVGLHSA
SVPGILALDLCPSDTSKVLTGGADKNVVVFDKNEEQIVATFKGHTKKVTSVIYHPSQSVV
FSASPDSTIRVWSVTGGNCVQVVRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGR
VLTKVTDESAGCALTCAQFHPDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIA
FSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRV
YICKQWSEVLNFTDHTGLVTGVAFGDNARFLSSAGMDRSLKFYSL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtctgcaacgaagtaccggagcatccttgcgtctccccggtgtccaaccaggtgtttgag
cgcaggctgatcgaaaagtacatcgccgaaaatgggacggatccgatgaatggacaaccg
ttgtctgaagaacagctcgtagatataaaattctcgcatcctattcgacccaaagcccct
tcggcaacgagcattcctgccattcttaagtcacttcaggatgagtggctccaagacaaa
gcaaccatcctcaccacagaaagaaagaagagaggcaaaactgttccagaggacttggtt
agagctgaggatcttggcaaatatcaccaagtggcttcacatgttggtcttcacagtgca
agtgttcctggtattctggctctggatctgtgtccttcagacaccagcaaagttcttact
ggtggagcggataagaacgtggtggtatttgacaagaatgaggagcagatcgtggcaaca
tttaagggtcacaccaagaaggtcacctctgttatttaccacccatcccagtctgtggtc
ttctctgcatctccagacagcaccatacgtgtgtggtctgtcaccgggggtaactgcgtc
caggtggtacgtgcccacgaggctggtgtcaccgggctctctctccatgctacaggggac
tacctgcttagctcctctgaggatcagtactgggcgttttctgatatccagactggtcgg
gtgctcaccaaagtgacggatgaaagtgctggctgtgctctcacctgtgctcagttccac
cctgatggtcttatttttggcactgggactgctgattctcaaatcaagatctgggatttg
aaggagcgtacaaatgtggccaacttcccaggccactctggacccgtcacctccattgcc
ttctctgagaacggatactatctggccaccggtgcccaggatagctctctgaagctgtgg
gatctgagaaaactaaagaacttcaaaacgattaccctggataacaactacgaggtgaaa
tccctggtgtttgaccagagcggtacctacctggctgtcggcggatctgacatccgagtc
tacatctgcaagcagtggtctgaggtcctcaactttactgaccacactgggttggtgacc
ggagttgcctttggcgataatgctcggttcttgtcctccgctggaatggatagaagtctc
aaattttacagcttg
DBGET
integrated database retrieval system
