Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027602G001
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Entry
GSTEN00027602G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
GSTEN00027602G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tng02000
]
GSTEN00027602G001
Transporters [BR:
tng02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
GSTEN00027602G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-ProteinID:
CAG07063
UniProt:
Q4RX19
LinkDB
All DBs
Position
11
AA seq
565 aa
AA seq
DB search
DNGEYNERGQWNSKIEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFVPYVIFFVCCGIP
VFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIVILAWAIFYLFNCF
TTELPWAGCGHYWNTGSSNAPFVSHLCFSAENCIDYYGENATNITNPNATSPVIEFWERR
VLKISDGIEHMGGVRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTATFPYVMLLVLLI
RGVTLPGAYDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNAYDNNC
YRYGGVFSTAYIYSSELCACVTVSPMVFPLLSPHIRDCIMLCCLNSGTSFLAGFAIFSVL
GFMAYEQNVPIEAVAESGPGLAFIAYPKAVTMMPLAPLWACLFFMMLIFLGLDSQFVCVE
SLVTAVVDLYPETFRRGYRRELLILGMSVVSFLIGLIMCTEGIFLFFLIKYKPLKYNNVY
TYPDWGYGIGWFMAMSSMVCIPLGIIWMIWKTPGTFTERMKKLTTPSKDLKMRGKHAALS
PYAANDAKLKADGKIATISEKETHF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gacaacggggagtacaatgagaggggtcagtggaacagcaagattgaattcgttttgtcc
gtggccggagagatcatcgggctgggcaacgtgtggaggtttccatacctgtgctacaaa
aatggaggaggagcgttcttcgtcccctatgtcatcttttttgtgtgctgcgggattccc
gtgtttttcctggagacggctttgggccagttcaccagcgaaggaggcatcacttgctgg
aggaaagtttgtccgctgtttgagggtatcggctacgccacgcaggtgatcgaagcccac
ctaaacgtgtactacatcgtgatccttgcctgggccatcttctacctcttcaactgcttc
accacagagctgccatgggccggctgtggccactactggaacacaggcagcagcaatgct
ccgtttgtgtcacacctttgcttttccgcagagaactgcatcgactactatggagaaaat
gccaccaacatcaccaaccccaacgccacgtctccggtgattgagttctgggaacgcaga
gtgctgaagatatcagatggtatcgagcacatggggggagtgcgctgggagctggccatg
tgtctggctttggcctggttcatctgctacttctgcatctggaaaggacccaagtcaact
ggcaaggtcgtgtacgtcacagctacgtttccttacgtcatgttgttggtcctcctaatc
agaggagtgacgctgccgggagcctatgacggcatcaaattctacctctacccggacatt
tcacgcctgtccgaccctcaggtatgggtggatgctgggacccaaatcttcttttcttat
gccatctgcttaggctgtctcactgctctgggaagttacaacgcctatgacaataactgc
tacaggtacggtggagtcttttctactgcatacatatattcttctgaattatgcgcttgt
gtcacagtgtcaccaatggtcttcccccttctctctccccacatcagagactgcatcatg
ctgtgctgtctaaacagcggcaccagttttttagcaggctttgctatcttttctgtgctg
ggcttcatggcctacgagcagaacgtccccatcgaggctgtggcagaatctggtcctggc
cttgcattcattgcataccccaaagctgttaccatgatgcctctggccccactctgggcc
tgtctgtttttcatgatgctcatcttcctcggtctggacagtcagtttgtgtgtgtggag
agtttagtgacagctgtggtggacctttaccctgagaccttcaggagaggataccgccga
gagctgctgatcctggggatgtctgtggtctccttcctcataggactcatcatgtgtaca
gagggtattttcctattcttcttgattaaatacaaaccgctcaagtacaacaatgtgtac
acctaccccgactggggctacgggatcggctggttcatggccatgtcttcaatggtctgc
atccctcttggaattatatggatgatctggaagactcctggcaccttcactgagaggatg
aagaagctgacaactccaagcaaggacctgaaaatgagggggaaacacgctgccctcagc
ccctacgctgccaacgacgctaaactcaaggccgacgggaaaatagccaccatctcagag
aaggagacacatttctag
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