Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030311G001
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Entry
GSTEN00030311G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00030311G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00030311G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
GSTEN00030311G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-ProteinID:
CAG09124
UniProt:
Q4RR58
LinkDB
All DBs
Position
14
AA seq
470 aa
AA seq
DB search
SHSEDALFKKLFAGYNKYSRPVPNVTDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEW
NDYKLRWRPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVTHMTKAHLFHNGKIRWVP
PAIYNSSCIIDVTFFPFDQHTARCKFGPYITYFFIIRRLPLFYTINLIIPCLLISCLTVL
VFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVI
TVFVLNVHHRSPSTHKMPRWVHSVFLDLIPRWLFMRRPAPEGRRRRLLLLQQEVMAERRR
GRLAGYQSGNYLSTSANWLTDGSLSEQPNRNSYEDLELGMLTSYFSFRPPSPRPLGTSPP
RQQNSQKKQEVPAGTNQQLSGARTTAQRLTKADSTGSDSYFLLSPSIIRALEGVHYIADH
LRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
tcgcactctgaggacgccctctttaagaagctgtttgcggggtacaacaagtactccaga
cccgtgcccaacgtcaccgacgtggtcatcgtcaaattcggactgtccatcgcacagctc
atcgatgtggatgagaagaaccaaatgatgacgaccaacgtgtggctgaaacaggagtgg
aatgactacaaacttcgctggaggccatctgactacgacaatgtgacgtctataagagtt
ccgtcagaactgatatgggtgccagacatcgtcctctacaacaatgcggacggtgagttt
gccgtcacccacatgaccaaagctcacctgttccacaacgggaaaattcgctgggtgccc
ccggccatctacaatagctcctgcatcatcgacgtcaccttcttcccatttgatcagcat
actgcaagatgtaaatttggcccttacattacctacttcttcatcatccgaaggctcccc
ttgttttacaccatcaacctcatcatcccgtgtttgctgatctcgtgtctcaccgttctg
gtcttttatctgccctccgactgcggcgagaagatcaccctttgtatctccgtgctgctg
tccctcaccgttttcctcctgctcatcacggagatcataccctccacctccctcgtcatc
ccgctgatcggcgagtacctcctcttcaccatgatcttcgtgacgctctccatcgtcatc
accgtcttcgtgctgaacgtgcaccatcgctctcccagcacacacaagatgccccgctgg
gtgcactccgtcttcctggatctgatcccgcgctggctgttcatgcggagaccagctccg
gaaggccggcgtcgaaggctcctgctgctccagcaggaggtgatggcagagaggaggcgg
ggtcggctggccgggtaccagtccgggaactacctcagcacctcggccaactggttgacg
gacgggtcgctgtcagagcagcccaacaggaacagctacgaggatttggagctgggaatg
ctgacgtcctatttttcgttccggccgccttcgcccagacctcttggaacctcccctccg
agacagcagaacagccagaagaaacaggaggttcctgcggggacaaaccaacagctatca
ggagccagaaccactgcccagaggctaaccaaagctgacagtaccggatcggactcctac
ttcctactgtcacccagcattattcgggctttggaaggggtccactacatcgctgaccac
ctgagggccgaggacgccgacttcagcgtgaaagaggactggaaatacgtggccatggtg
attgaccgaatcttcctgtggatgttcattattgtgtgtctgctggggaccatcgggttg
tttctaccgccgtggctagccggcatgatctag
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