Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032132G001
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Entry
GSTEN00032132G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00032132G001
04082 Neuroactive ligand signaling
GSTEN00032132G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00032132G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00032132G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
AfaD
Motif
Other DBs
NCBI-ProteinID:
CAG10476
UniProt:
Q4RMA6
LinkDB
All DBs
Position
10
AA seq
447 aa
AA seq
DB search
SPIYKRSPDMTKSLMTKSEQLLRIDDHDFTMRPAFGGRNETESLNYSSDHDYDTPGSAGP
PIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFQSTNNQSMTFDSRLVKKIWV
PDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLE
IESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHF
TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM
PRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERLPCTCGIGNPDDM
MIDPQITGYGSMDMNTTGNYGMPENGGRQERMLAQVALNDPQIASQMKPSRGYVNIWIDT
HAIDKYSRVVFPGAYILFNVIYWSIYL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
agtccgatctacaaacgcagcccagacatgaccaaatctctgatgaccaaatccgagcag
ctgctcagaatagacgaccatgatttcaccatgaggccggcatttggaggtcggaatgaa
accgagagtctaaactatagctcggaccacgattacgacactccgggcagcgctgggcct
ccgatcccagttggagttgatgttcaagtcgaaagtttggacaccatctcggaggtggat
atggacttcaccatgaccctgtacctccgtcactactggaaggacgagcgtctgtccttc
cagagcaccaacaaccagagtatgacattcgacagccgtctggtgaagaagatttgggtc
cccgatatgttcttcgtccattccaagcgctccttcatccacgacaccaccacagacaac
gtgatgctgagggtttaccccgatgggaacgttctctacagcctcagagtcaccgtcacc
gccatgtgcaacatggacctgagccgtttccctctggacacccagacctgctcgctggag
atcgagagctacgcttacaccgacgacgacctgatgctctactggaaaaagggtaacgag
tccctgaacacagacgacagaatatctctgtctcagttcctcatccagaaatttcacacc
accaccaagctggctttctacagcagcacaggctggtacaaccgcttgtacatccacttc
actctgcggcgccacatcttcttcttcctgctgcagacctacttccccgctaccctgatg
gtcatgctgtcctgggtgtccttctggatagaccgcagagccgtccccgccagggtgccc
ctaggcatcaccacggtgctgaccatgtccaccatcatcaccggagttaacgcctccatg
ccgagggtctcctacatcaaagcggtggacatttacctctgggtcagttttgtcttcgtc
tttctgtcggtgatcgagtacgcggcagtcaactacctctccaccgtacaagagaggaaa
gaacggaagctgagggagaggttgccatgtacgtgcggtatcggcaacccggacgacatg
atgatcgacccccagatcactggctacgggtctatggatatgaacaccacggggaattat
gggatgccggagaacggtggccgtcaggagcgaatgctggcccaggtggcgctgaatgac
ccgcagatcgccagccagatgaagccttccagaggctacgtgaacatttggatcgacaca
cacgccatagacaagtactccagggtggtgtttccaggagcatacatcctctttaacgtc
atctactggtccatctactta
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