Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033708G001
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Entry
GSTEN00033708G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08527
retinoic acid receptor alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00033708G001
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tng03310
]
GSTEN00033708G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
GSTEN00033708G001
Nuclear receptors [BR:
tng03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
GSTEN00033708G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
CAG11671
UniProt:
Q4RIW1
LinkDB
All DBs
Position
undetermined
AA seq
459 aa
AA seq
DB search
MRGMFGFGPLDPSANVVFLLQPRSRCWNAGGQRLLRRTIESRSSSSEELVPSPPSPPPPP
RVYKPCFVCQDKSSGYHYGVSACEGCKVGAAAGLRVWVLVLVQLRFITLIITVSTVEPHH
EPVCVCVSVCVCVSVRNDRNKKKKESPKAVGGELRADGRAGGHRGEGAEGPPGDLPLALP
AGQVHHELQRRPPRASGPGPVGQVQRAGHQVHHQDRGIRQAGSRLHRADHRRPDHAAEGR
LPGHSDPAHLYPVHPRPGHHDLLRRADPQPDPDAQRRLRAPHRPGLHLRQPAAAHRDGRH
GDGPPQRHLPDLRRWRRLWGRAGSSEEPGLSSGRTFWRSFRFSEAAPPISSSLCGASQGD
RQDLEEPSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERVVSL
KMEIPGSMPPLIQEMLENSEGQDGQSGGGGGADGGSSPS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaatgtttggattcggtcctttggatccgagcgcaaacgtcgtctttctcctt
cagccccggagccgctgctggaatgcgggggggcagcgcctcctccggaggaccatcgag
agccggagcagcagttcggaggagctggtccccagcccgccgtcgccgcccccccctccc
cgcgtctacaagccctgcttcgtgtgccaggacaagtcctccgggtaccactacggcgtc
agcgcctgcgagggctgcaaggtaggagccgctgccgggttgagggtttgggtcctggtc
ctggtccagcttcgctttattaccctcataatcacagtgagcacagttgagccccatcat
gaacctgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtccgttcggaacgaccggaac
aagaagaagaaggagagcccgaaggcggtaggtggagagctacgagctgacggccgagct
ggaggccatcgtggagaaggtgcggagggcccaccaggagaccttcccctcgctctgcca
gctgggcaagtacaccacgaactccagcgccgaccaccgcgtgcgtctggacctgggcct
gtgggacaagttcagcgagctggccaccaagtgcatcatcaagatcgtggaattcgccaa
gcgggttcccggcttcaccgcgctgaccatcgccgaccagatcacgctgctgaaggccgc
ctgcctggacattctgatcctgcgcatctgtacccggtacacccccgaccaggacaccat
gaccttctcagacgggctgaccctcaaccggacccagatgcacaacgccggcttcgggcc
cctcaccgacctggtcttcaccttcgccaaccagctgctgcccatcgagatggacgacac
ggagacgggcctcctcagcgccatctgcctgatctcaggagatggaggagactctgggga
agagctgggagttctgaggagccgggtttgtcctcaggaagaaccttctggaggagcttt
aggttctctgaagcagccccacccatcagcagctctttatgcggggcttctcagggagac
cgtcaggacctggaggagccctccaaggtggaccagctccaggagccgctgctggaggcc
ctgaagatctacgtgaggaagcggcggcccagcaaacctcacatgttccccaagacactg
atgaagatcaccgacctgcgcagcatcagcgccaaaggggcggagcgcgtcgtctccctg
aagatggagatccccggctccatgccaccgctcatccaggagatgctggagaactcggag
ggtcaggacggccagagcggcggcggcggcggcgcagacggaggctccagccccagc
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